| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shel_00020 |
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| Symbol | |
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| ID | 8393894 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Slackia heliotrinireducens DSM 20476 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013165 |
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| Strand | + |
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| Start bp | 1741 |
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| End bp | 2838 |
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| Gene Length | 1098 bp |
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| Protein Length | 365 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 644984777 |
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| Product | DNA polymerase III, beta subunit |
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| Protein accession | YP_003142428 |
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| Protein GI | 257062756 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0592] DNA polymerase sliding clamp subunit (PCNA homolog) |
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| TIGRFAM ID | [TIGR00663] DNA polymerase III, beta subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.000592113 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.0000599685 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | TTGAAGTTCA GCATCAACAA GTCGGAATTC CTCAATGCGC TTAATGTTGT AGCCAAGGGG
GCCTCCAGTC GTTCCACGCT GCCGGTTCTG GCAGGCGTGA AGATTACCGC ACGCTCGGCG
TCGCTCGTTC TCGAAACCAC GGACTTGGAC CGTTCCATTC GCTGCGTCGT AGCCGCGTTG
GTTGAAGACG AAGGCATGTG CGTCATTCCT CAGAAGCTGC TGTCCGACAT CGTCAAGAAC
CTTCCCGATG CAGCCATCAC TGTGGACGTG GACGATTCGG AAGCCACCGT CTCCTGCGAC
AAGACGTCCT TCACGCTGCA CACCCTGATT CCCGATGACT TCCCCAGCTT CCCCGAGGTG
AACATCGACA ATCAGATTAC CGTTCCGTTC AAGCAGTTCA GCAGCGCCGT CAAGAAGGTG
GCCAAAGCCG CGTCCAAGGA TCAGTCCCGC GCCGTGCTGA CGGGCGTTCT GCTGCGCACC
ACGCCCGAAG GCATGTCCAT CGTGGCTACC GATTCCTATC GTTTGGCTGT GTGCAACCTG
AAATTCGACT CCGCCGGCGA GGAATTCGAA GCCCTTGTGA CCAGTTCATT CGTACTCGAA
GTGGCGTCGT TGCCTGAGGT GCAGGAGACC ATCGACATCT GCCTGAGCGC CAATCAGGTC
ATGTTCCGCT TCGGCGACAC CGTGATGGTG AACCGCCGCA TTGAGGGCAA ATATCCCGCT
TACGAGAAGC TGATCGCGGG CTCCTATACC ACCAAGACCT GTTACACCAC CTCGGCGCTG
ATCACTGCCG TCAAGCGTGT GGGCCTGATG AGCTCCGCTG CGTCGCCGAT CAAGTTCGAC
ATCAACGAAG CTACCAAGAA TACGGTGCTT TCCACCAACT CCCAGGAAAT CGGCACCGCA
TCCGAGGTCG TTTCCTGCGA GGTCAACGGC GAAAACGTGG AAATAGCCCT GAACCATCAG
TATATCATCG ACGGTCTGTC CTCCATTTCC ACGGACCACG TGTTCTTCGA GACGCAGGGC
TCCATGAAAC CCGGCGTGTT CAGGTCCGGC GAGGGGGAAG ACTTCCTGTA TCTGCTGATG
CCTGTCCGCC TGGCTTAG
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| Protein sequence | MKFSINKSEF LNALNVVAKG ASSRSTLPVL AGVKITARSA SLVLETTDLD RSIRCVVAAL
VEDEGMCVIP QKLLSDIVKN LPDAAITVDV DDSEATVSCD KTSFTLHTLI PDDFPSFPEV
NIDNQITVPF KQFSSAVKKV AKAASKDQSR AVLTGVLLRT TPEGMSIVAT DSYRLAVCNL
KFDSAGEEFE ALVTSSFVLE VASLPEVQET IDICLSANQV MFRFGDTVMV NRRIEGKYPA
YEKLIAGSYT TKTCYTTSAL ITAVKRVGLM SSAASPIKFD INEATKNTVL STNSQEIGTA
SEVVSCEVNG ENVEIALNHQ YIIDGLSSIS TDHVFFETQG SMKPGVFRSG EGEDFLYLLM
PVRLA
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