| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_4070 |
|---|
| Symbol | |
|---|
| ID | 4457594 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Syntrophobacter fumaroxidans MPOB |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008554 |
|---|
| Strand | + |
|---|
| Start bp | 4950865 |
|---|
| End bp | 4951752 |
|---|
| Gene Length | 888 bp |
|---|
| Protein Length | 295 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 639704840 |
|---|
| Product | inner-membrane translocator |
|---|
| Protein accession | YP_848170 |
|---|
| Protein GI | 116751483 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0559] Branched-chain amino acid ABC-type transport system, permease components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.23867 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGGAACGG ACATACTCCA GTACACCATC AGCGGTCTTA CCATCGGCGT GATCTACGCC
ATGGTGGCGC TTGGCTACAA CATCATTTAC AACGTCACTG AAATCATCAA TTTCGCTCAG
GGTGAGTTCG TGATGCTCGG CGGTCTTTTT GCCGCCTTTT TTATTGGCGT CCTCCGGCTT
CCTATCGTGG TGGGCTTCTT CGGCGCGGTT CTCGCCACCG GCCTGGTGGG TCTCGTCATG
GAGCGGTTCG TGATCCGGCG GGCGAAAAAC GCGAGCGTAC TCTCGCTGAT CATCATCACC
ATTGCCCTCT CGATCCTGCT CAAAGGGGGC GCCATGATCT GGTGGGGGAA GGACCCTCAC
AGCGTTCCCG CCTTCAGCGC CGGTGGTCCC ATTCTTGTGG CCGGCGCCGC CATCCAGACC
CAGGCGTTCT GGGTCGTGGG CGTCAGCGCG CTGATCGTGA TCGGTCTCAC CGTCTTCTTC
CACAGGTCCA CCTACGGCAA GGCCATGCTC GCCTGCGCCG ACAATCCCAA CGCGGCGCGC
ATGGTGGGAA TCCCGGTCCG TCGGATGGTG CTGCTGTCCT TTGTGCTGAG CGCGGGCATC
GGGGCGGCCG CCGGGGTGAT CATTACCCCA ATATCGATGA TGGAATTCGA TCGAGGTGCC
CTCCTCGGGC TGAAGGGTTT CGGGGCCGCG GCGCTCGGAG GGCTGGGAAG CTTCTTCGGG
GCGCTGGTGG CAGGCGCGAT CCTGGGGCTT GCCGAATCGT TTTGCGCGGG GTACGTGTCT
TCGGGGTACA AGGACGCGGT GGCCCTCGTC TTGCTCTTGC TGGCATTGTT CTTCAAACCC
GAGGGCCTTT TCGGCAGTGG CGAGGCCGCC AAGCTGAAAA GGTTCTAG
|
|---|
| Protein sequence | MGTDILQYTI SGLTIGVIYA MVALGYNIIY NVTEIINFAQ GEFVMLGGLF AAFFIGVLRL
PIVVGFFGAV LATGLVGLVM ERFVIRRAKN ASVLSLIIIT IALSILLKGG AMIWWGKDPH
SVPAFSAGGP ILVAGAAIQT QAFWVVGVSA LIVIGLTVFF HRSTYGKAML ACADNPNAAR
MVGIPVRRMV LLSFVLSAGI GAAAGVIITP ISMMEFDRGA LLGLKGFGAA ALGGLGSFFG
ALVAGAILGL AESFCAGYVS SGYKDAVALV LLLLALFFKP EGLFGSGEAA KLKRF
|
|---|
| |