Gene Sfum_4032 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_4032 
Symbol 
ID4457626 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp4900350 
End bp4900817 
Gene Length468 bp 
Protein Length155 aa 
Translation table11 
GC content57% 
IMG OID639704803 
Productputative anti-sigma regulatory factor, serine/threonine protein kinase 
Protein accessionYP_848133 
Protein GI116751446 
COG category[T] Signal transduction mechanisms 
COG ID[COG2172] Anti-sigma regulatory factor (Ser/Thr protein kinase) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGCATC GGGCTGCGGA AGCGTTCAAA GGGGCATGCA TGACGGCCGA TGAGGTTTCC 
TTTCGCGTCG AGGGCAATTT GTCCGAATTG GACCGTCTTG CCACGATCGT CCATCGTTTC
GGGGAAGAAC ACCATCTTCC GGACAAAGTC GTGTTCGCGC TGAACCTCGC CCTGGACGAA
CTCATCACCA ATACCATCAA GTACGGTCGG AAAGAAGACG GCAAGTACAA CATCATGGTC
GGTCTCGCCT GCGCGTCCGG GGCAGTCACG CTGACCGTGG AGGATGACGG CGCCCCTTTC
GATCCGCTCC AGGCCGAGGA GCCCGATATC ACCTGTCCCA TCGAGGAGCG GGAAATCGGG
GGAATGGGAC TGCATTTGCT GCGCAGGCTG ATGGACGAAA TCAAATATGA ACGGCGCGAT
GGCAAAAATC TGATCCGGAT GAAGAAGATT TTCGAGCCTG CATCCTGA
 
Protein sequence
MSHRAAEAFK GACMTADEVS FRVEGNLSEL DRLATIVHRF GEEHHLPDKV VFALNLALDE 
LITNTIKYGR KEDGKYNIMV GLACASGAVT LTVEDDGAPF DPLQAEEPDI TCPIEEREIG
GMGLHLLRRL MDEIKYERRD GKNLIRMKKI FEPAS