Gene Sfum_4030 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_4030 
Symbol 
ID4457624 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp4897060 
End bp4897581 
Gene Length522 bp 
Protein Length173 aa 
Translation table11 
GC content57% 
IMG OID639704801 
Productcyclic nucleotide-binding protein 
Protein accessionYP_848131 
Protein GI116751444 
COG category[T] Signal transduction mechanisms 
COG ID[COG0664] cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.900362 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACTCGT ACACGGACCG CGGGCATCCG CCTAGCGAAT ACCAGGAAAA CCTGGAAATC 
CTTCTTCAGA TTCCCGTATT CTCCGGCTTG CCCATGGAAG CCCAGAAGGT TCTGGCTTAT
TTGTGTACAC GGGAAGTCTT CAAACCCGGC GAATTCCTTT TCACGGAGGG GGACACGGAC
GAACACGCCT ATTTCATCCT GGAGGGAAAA GCCGGACTGA TGCTGACCGT TGACGGGACG
AGCGAGCAAG TGAGAGAGTA CGGGGAAAGC ACTTTCCTCG GGGGACTCTC GCTTCTCTGC
CCGGCCAAGC GGCTCTATTC CCTGAAAGCC CTGACGCGCA TGCGATGCGT AATCTTCGCC
CGGGACAAGT TCCAGCGAAC CCTGGAACAG TTTCCCGATC TCGCCCGCAT GGTGATCCAG
GAGATTTGCA CCCTCATTCA CCAATGGGAA TCGAGCCTGA TCGTCGAACA CGCCCGGCAT
TGCCCCGATT GCAGGGGAAA CGTCGGGGTG AGCCTGATTT AG
 
Protein sequence
MNSYTDRGHP PSEYQENLEI LLQIPVFSGL PMEAQKVLAY LCTREVFKPG EFLFTEGDTD 
EHAYFILEGK AGLMLTVDGT SEQVREYGES TFLGGLSLLC PAKRLYSLKA LTRMRCVIFA
RDKFQRTLEQ FPDLARMVIQ EICTLIHQWE SSLIVEHARH CPDCRGNVGV SLI