Gene Sfum_3996 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_3996 
Symbol 
ID4457675 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp4851724 
End bp4852914 
Gene Length1191 bp 
Protein Length396 aa 
Translation table11 
GC content57% 
IMG OID639704767 
Producthypothetical protein 
Protein accessionYP_848098 
Protein GI116751411 
COG category[L] Replication, recombination and repair 
COG ID[COG3598] RecA-family ATPase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000116377 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACATCA CAGACACCCT CTTGGCGGCA TGGCCGGGGA ACTTGAAGGC CGACGGAACA 
TTCACCTGTC CCTCGTGCGG CAGAGCAACC CTGACGGTAG ACGCGGATAC AGCACACTGT
CCGTCTGAGG GCCGTAGCTT CGATGTCGGC ACACTGCTTG GACTTTTACA GCGAGCGCGG
GGAAACGGGA GCGAACCCAA TCAGGAGGCT CCACCCGAGC AACCGGACCC GGTTTGCTTC
CAGGATGCTA TCCTTGACGC CGACGCCTTT GTCTCGCTCC AGCTTCCCGA GAAAAAATCC
TACCTGCACC CATGGATCAA TGAGCAGTCC ATTGTTTTCA TCGTCGGTTG GCGGGGTGTG
GGCAAGTCGG GGTTCATCCT AGGAGCCCTC GATGCCGTCA CAAAGGGGAA ACCGTTCGGG
CCGTGGACAC CGGGCGAACC CGTGAATTGT CTGTACCTCG ACGGCGAAAT GGCCACAGTG
GACGTGCAGA AGCGACTCCG CGAAATGGGA ACCGCCGGGA GGAAATCCAG GCTGCTCGTC
TACTCGGATG CCTACGCGTA CAGTCTCAGA CTTCCGAAGG CAAACTTGCT CGATGAGAAG
TGGCGCGACG GCTTCAAAAA GAGCCTGCTG GACCTCGACG TCAAGATAGT CGTGATCGAC
AACCTAGCCT CTGTGACAGG CGGCATCGAT GAAAATTCCA AAGAAGCCTG GGATCCCATA
GGCGCTTGGC TGCTCCAGCT TCGATTTGCA GGAATCACGA CCATCCTGAT TCACCACGAG
GGCAAGACCG GACAGCAACG CGGCACATCG GGCCGGGAAG ACCACGCCGA TGTGTGCATA
TCCCTGAAGA AGCCTCATGA CTATCTGGCA GAGCAAGGCG CAAGGTTCAT CGCCAGCTTC
ACGAAGTCCC GAATCCCAAC CGAACACTTA CCCCTGATTG CCGACACGGA ATTCCAGCTT
ATGAATACCA TTGGGGACAC GCAGGAATGG ACATGGAAGT CGGCACAACA GGCCACGAAG
ATGCAAATTC TGAAGAACCT GGACGAAGGC ATGTGCCAGA CCGACGTTGC CGACTTGCTC
AAAGTGAGCA AGGGGCAGGT TTCCAAGGTT CGAGCGGCAG CCATCAAAGC CCACTGGATG
ACGGAAAAAA ACAAGCTGAC ACAGTTGGGA TTTGGTGCCT TGGAGGGGTG A
 
Protein sequence
MNITDTLLAA WPGNLKADGT FTCPSCGRAT LTVDADTAHC PSEGRSFDVG TLLGLLQRAR 
GNGSEPNQEA PPEQPDPVCF QDAILDADAF VSLQLPEKKS YLHPWINEQS IVFIVGWRGV
GKSGFILGAL DAVTKGKPFG PWTPGEPVNC LYLDGEMATV DVQKRLREMG TAGRKSRLLV
YSDAYAYSLR LPKANLLDEK WRDGFKKSLL DLDVKIVVID NLASVTGGID ENSKEAWDPI
GAWLLQLRFA GITTILIHHE GKTGQQRGTS GREDHADVCI SLKKPHDYLA EQGARFIASF
TKSRIPTEHL PLIADTEFQL MNTIGDTQEW TWKSAQQATK MQILKNLDEG MCQTDVADLL
KVSKGQVSKV RAAAIKAHWM TEKNKLTQLG FGALEG