Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfum_3938 |
Symbol | |
ID | 4457723 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Syntrophobacter fumaroxidans MPOB |
Kingdom | Bacteria |
Replicon accession | NC_008554 |
Strand | - |
Start bp | 4796449 |
End bp | 4798407 |
Gene Length | 1959 bp |
Protein Length | 652 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 639704711 |
Product | sodium/hydrogen exchanger |
Protein accession | YP_848042 |
Protein GI | 116751355 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0569] K+ transport systems, NAD-binding component [COG4651] Kef-type K+ transport system, predicted NAD-binding component |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.455645 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGGCATAG CCTCCGACAT CGTCATCATC GTGGTCGCGG CCCTGATCGG GGGCATCGTG GCAAACAAGC TGAAGGTGCC CCTGATGCTG GGCTACATTG TCGCGGGAAT CGCGGTCGGC CCTCATACCG GGGGAGTTAC CGTATCCGAA ATCCACGACA TCGAATTGCT GGCGGAGATC GGCGTGGCGC TTCTGCTTTT TGCGCTCGGC CTGGAATTTT CGCTCACCAA GCTGAAACCC GTGCGCACCG TCGCGCTTGT CGGCACACCC ATCCAAATGC TGCTCACCAT CGGGTGCGGC TTCGTCATCG GTCAACAACT GCTCGGCTGG GACACGATCT CTTCGCTCTG GCTGGGCGGT CTGATCTCCC TGTCCAGCAC CATGGTGATC CTGAAAACAC TGATGAACCA AGGGTGGCTC GGTACCCTTT CAAGTCGCGT GATGATCGGC ATGCTCATTG TCCAGGATCT GGCCGTCGTG CCCCTGATGA TTCTCCTTCC TCAGCTGAAC AATGCGGAAA GCGGCCTGCC GATTCTCGGA CTTGCCGCAA TGAAGGCGAT CGTCTTCCTG GCTGCAATGG TCCTGCTTGG CACGAGGCTG CTTCCCCGGC TGCTGACGTA CGTCGCTCAA TGGAACTCGC GCGAACTGTT CCTCCTGACC ATCACGGCGA TGGGGCTCGG CATCGGCTAC GCCACCTACC TGGTCGGTCT TTCGTTCGCC TTCGGCGCCT TCGCTGCCGG GATGGTCCTG AGCGAGTCGG ATTACGGGCA CCAGGCGCTG AGCGATATCA TCCCCCTGAG GGACGTGTTC GCGCTCCTCT TCTTCACGTC TGTGGGGATG CTTCTGGACC CTCAGTTTCT TCTCGACCGC TGGGACACGG TCCTGACGCT CGTGCTCCTG GTTTCCGTGT GCAAGGGCGT CATTTTCGCC GGATTGGCGC GAATCTTCGG ATACGGCAAC GTCGTTCCCC TGGCCGTGGG ACTCGGACTT TTCCAGATCG GCGAGTTTTC CTTCGTGCTG GCCCGGGTGG GGCTCGCCGA CCGTGCCCTG TCAACGGAAA TGTATTCCCT GGTGCTCAGC ACGGCCATCA TCAGCATGAT GCTGACCCCG CTCGTTTCGA GCCTCACCGC TCCGCTGTAT TCGCTTCGCA AACGATGGTT CAAACGCGAA CCGCTCCAAA CCATCAATCT GCCGGAGACC GGCCTGCACG ATCATGTGGT GATCGCCGGA GCGGGAAGAA TCGGCCGCCA TGTCGCGGGG GTGCTGCATC ATTTGAAACT GTCCTTCGTG CTCGTGGAAC TGGATTATCG GCAGGTCCAG CAAGTCAGGG AAGCCGGGTT CCCGGTGGTC TACGGCGACG CCGGCCAGGA AGCGGTCCTG GAAGCCGCCG GCATCGAGGG GGCCCGCCTG CTCCTGATCA CCATTCCCGC CATCGTGTCG GCGCAGGCCA TCGTCGATCA AACCCGTCGC CTCAACCCTC GCCTGGGTAT CGTGGCCCGC TCGGAAGGGC TGGAACAGAT GAAGGCGCTT CATGAAAAAG GGGTCTACGA GGTGGTACAA CCCGAATTCG AAGCCGGCCT GGAAATCACC CGGCAAGCCC TGATCAGCCT CAATGTTCCG GCCACGGACA TCCTGCGCTA CACCGACGCG GTTCGCCGTG AGCTCTACGC TCCCATTTGT CGAAACCAGG AATGCGAAAC CGTGGCACTG CTTCGGGACG CCAGGCGCCT GCTCGAAATG AACTGGATGA CCCTGGGTCC GGAAAGCCCT TTGAACGATC GAACCATCGG GGAATTGAAC ATCCGGACAA ACACCGGCGT CTCCATCGTT GGGGTCATGC GCGGCGGGAC CCTGCACCCC AACCCCGGCC CCGACTTCCG TTTCGCCCGG GGCGATATGA TCGCCGTCCT CGGAGAACCC GAGCAGTTCA ACGCCCTTCA GGAATTCCAC ACAGCATGA
|
Protein sequence | MGIASDIVII VVAALIGGIV ANKLKVPLML GYIVAGIAVG PHTGGVTVSE IHDIELLAEI GVALLLFALG LEFSLTKLKP VRTVALVGTP IQMLLTIGCG FVIGQQLLGW DTISSLWLGG LISLSSTMVI LKTLMNQGWL GTLSSRVMIG MLIVQDLAVV PLMILLPQLN NAESGLPILG LAAMKAIVFL AAMVLLGTRL LPRLLTYVAQ WNSRELFLLT ITAMGLGIGY ATYLVGLSFA FGAFAAGMVL SESDYGHQAL SDIIPLRDVF ALLFFTSVGM LLDPQFLLDR WDTVLTLVLL VSVCKGVIFA GLARIFGYGN VVPLAVGLGL FQIGEFSFVL ARVGLADRAL STEMYSLVLS TAIISMMLTP LVSSLTAPLY SLRKRWFKRE PLQTINLPET GLHDHVVIAG AGRIGRHVAG VLHHLKLSFV LVELDYRQVQ QVREAGFPVV YGDAGQEAVL EAAGIEGARL LLITIPAIVS AQAIVDQTRR LNPRLGIVAR SEGLEQMKAL HEKGVYEVVQ PEFEAGLEIT RQALISLNVP ATDILRYTDA VRRELYAPIC RNQECETVAL LRDARRLLEM NWMTLGPESP LNDRTIGELN IRTNTGVSIV GVMRGGTLHP NPGPDFRFAR GDMIAVLGEP EQFNALQEFH TA
|
| |