| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_3887 |
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| Symbol | |
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| ID | 4457777 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Syntrophobacter fumaroxidans MPOB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008554 |
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| Strand | - |
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| Start bp | 4738209 |
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| End bp | 4738772 |
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| Gene Length | 564 bp |
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| Protein Length | 187 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 639704660 |
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| Product | ECF subfamily RNA polymerase sigma-24 factor |
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| Protein accession | YP_847991 |
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| Protein GI | 116751304 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.526394 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.0354938 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGACCGGG ACAGCGACTA TCAGGTGGTT GCCTCCGTTC TTGCGGGGGA TACGGAAGCC
TATGCCGTTC TGGTAAAGCG TTATCAGAAG CCCATATACA ACCTGATGTA TCGCATGACC
GGTTCCTGCG AAGATGCATT GGACCTGGCA CAGGAAACTT TCATCAAGGC CTATGCGTCG
CTGCACAGGT TTCGGGAAGG GGGCAGGTTT TTCCCCTGGC TGTACAGCAT CGGATTGAAT
CACTCGAGGA ACTTCCTGCG TCGCAACAAG GCGCGTCAGA CCCTCGACGT TGAAGATTGC
GATCCGGGCT CCGGGTTGGA CTATCCCGGC CAGGAGGAGG ACAGGCTGTG TGCCCGATTG
GACAGCATGG GCGTCCGCAG GGCGCTCGAC CGGCTCCCCG TTGATTACCG TGAGGCCCTG
ATGCTCCGGT ATCACCAGGA ACTCTCGATG GAGGAGATTG CCGCCGCATT GCGGATTTCT
TTGAGTGGCG CAAAGATGAG GGTCCATCGG GGATTGGAGA AATTGCGCGA GTTGCTGGAG
AATGACCGTG ATGGTGAAAG ATAG
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| Protein sequence | MDRDSDYQVV ASVLAGDTEA YAVLVKRYQK PIYNLMYRMT GSCEDALDLA QETFIKAYAS
LHRFREGGRF FPWLYSIGLN HSRNFLRRNK ARQTLDVEDC DPGSGLDYPG QEEDRLCARL
DSMGVRRALD RLPVDYREAL MLRYHQELSM EEIAAALRIS LSGAKMRVHR GLEKLRELLE
NDRDGER
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