Gene Sfum_3875 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_3875 
Symbol 
ID4457800 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp4729575 
End bp4729844 
Gene Length270 bp 
Protein Length89 aa 
Translation table11 
GC content61% 
IMG OID639704648 
Producthypothetical protein 
Protein accessionYP_847979 
Protein GI116751292 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0338911 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCACCGGA TATTCAAGCT ACCCATCTGT TGTATCCTGG TCGCGTGCTT GCATGCGGCC 
TTCGCCCTCG CCGCCGATCC GCCCGCCGGC ACGGCACCCG CGCAGGAACC GGTCTCCATC
GCCGCCGTTC AGGATGGACC TTCGCTGCAG CTGAGCGAGA CCAGTTTCGA TTTCGGGGAG
ATGAGCGAAT CAAAGAGCTA CGTACACGAC TTCAAGATAA AGAACGCCGG CACGGCCGAG
CTGCAGATCA AGAAAGTGAC GCCCGGCTGA
 
Protein sequence
MHRIFKLPIC CILVACLHAA FALAADPPAG TAPAQEPVSI AAVQDGPSLQ LSETSFDFGE 
MSESKSYVHD FKIKNAGTAE LQIKKVTPG