Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfum_3854 |
Symbol | |
ID | 4457814 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Syntrophobacter fumaroxidans MPOB |
Kingdom | Bacteria |
Replicon accession | NC_008554 |
Strand | + |
Start bp | 4708074 |
End bp | 4708571 |
Gene Length | 498 bp |
Protein Length | 165 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 639704627 |
Product | DNA mismatch endonuclease vsr |
Protein accession | YP_847958 |
Protein GI | 116751271 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG3727] DNA G:T-mismatch repair endonuclease |
TIGRFAM ID | [TIGR00632] DNA mismatch endonuclease Vsr |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.151081 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.0341159 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGATACCG TGGACAAAAC GACACGCTCG AGAATCATGT CCAGGGTCGG TCAAAAGGAC ACCGGCCCGG AGATGAAGCT TCGAAGGTCA CTGCACAAAA TCGGATTGCG ATATCGGCTT CACGACAAGA GGTTGCCGGG ATCTCCGGAT ATCGTCTTCC CCAGGTTCAA GGCGGCTTTG TTCGTCCATG GCTGTTTCTG GCACCGCCAC GGTTGCAAGG CGACCACGAC GCCCGGAACC AACGTGGATT TCTGGCGCAA GAAGTTCGAC GAAAACATCG CCAGAGACCG ACGGCACATC GAAGCCCTTC AGGATGCGGG TTGGAGGGTG GCCGTGGTCT GGGAGTGTTC GCTAAAAGGC AAAAGAGCCG ACCCCGATGA GGTTGCGAGA CTTGTGAGCG AATGGTTGGT GTCGAGCGAG AAGCACAAGG TTATCCCTGA ACATGCTCAG ACCGTAAGCT CGCGGAGGGA AATCTCGCTT CCCCAGGAGG AGCCATGA
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Protein sequence | MDTVDKTTRS RIMSRVGQKD TGPEMKLRRS LHKIGLRYRL HDKRLPGSPD IVFPRFKAAL FVHGCFWHRH GCKATTTPGT NVDFWRKKFD ENIARDRRHI EALQDAGWRV AVVWECSLKG KRADPDEVAR LVSEWLVSSE KHKVIPEHAQ TVSSRREISL PQEEP
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