| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_3846 |
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| Symbol | |
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| ID | 4457806 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Syntrophobacter fumaroxidans MPOB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008554 |
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| Strand | + |
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| Start bp | 4690544 |
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| End bp | 4693720 |
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| Gene Length | 3177 bp |
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| Protein Length | 1058 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 639704619 |
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| Product | helicase domain-containing protein |
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| Protein accession | YP_847950 |
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| Protein GI | 116751263 |
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| COG category | [K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG0553] Superfamily II DNA/RNA helicases, SNF2 family |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.064852 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAACGA CAAACGCAAG TTCGGCGAAC GGTGTCGTTC GTTTCGGTGC CGTTCCCGAG
CCCGGTCAAC TCGTCGAAGT CCGACGTCGT CAATGGGTGG TCACCGATGT TTCCAGTGGA
GCCTTGTCAC CGGCGAGCAG CGGTGATCAA CACCTCGTCG GCCTGTCCTC CCTGGACGAA
GATTCCATGG GCGAAGAAAT CCAGGTCGTC TGGCAGATGG AGGCCGGAGC CCAGGTCCTG
GAAAAGGCGG GTCTGCCGTC GATCACCGGC TGGGACAGCG ACGACCGCCT GGAGGCCTTT
CTCGACGCCG TTCGCTGGGG AGCCGTCACC AACGCGGATC GCTCTTTTCT GCAATCACCT
TTCCGGAGCG GGATAACCAT CGAGGACTAC CAGCTCGATC CGTTGGTTCG AGCCGTCGAG
ATGGCCCGCG TCAATCTCCT CATCGCGGAC GACGTCGGCT TGGGTAAAAC GATCGAGGCG
GGACTGGTCA TCCAGGAGCT GCTCGTCCGT CATCGCGCCA GGACCGTGTT CGTCGTTTGC
CCCGCCAGCC TGCAGGTCAA GTGGCAGACC GAGATGCAGG AGAAATTCGG CCTCGAGTTT
CGGATCGTCG ACACCGAGTA CATCAAGCGC CTCCGTCGCG AACGCGGCAT CCACGTGAAT
CCCTGGACGT CCTATCCACG TCTCGTCACC TCAATGGACT GGATGAAGAG CGGCGAGGGT
TTCCGGTTGT TGAAGGACGT ACTTCCTCCT CACATTACCT ATCCGAGAAA ATTCGACATT
CTGGTCGTCG ACGAGGCGCA CAACGTCGCA CCGGCGTCGG CATCCATGTA TGCCCTGGAA
AGCCAGAGAA CGCGGCTGGT CCGGTCGCTC GCTCCTCACT TCACCCATCG GCTGTTTTTG
AGCGCCACAC CCCACAACGG ATATCAGGAG TCGTTCACCT CGTTGCTGGA GTTGCTGGAC
GATCAGCGGT TCGCCAGGAC GGTGATGCCG GACGAGAAAC AACTTCATCG CGTCATGGTT
CGCCGTCTGA AGAGCGACAT CGTCGACGCG AACGGCACGC CGGTGTTTCC GGTGCGCAAG
CTCGAAGGTC TCGAAATCGA CTACGCCGAG GAGGAGCGCC AGATCCACGC CTTGCTCGGA
AAGTACACGG CCGACCGTTC GAAGAGCGTC AAGGGCACGC GCTTCGAATA TGGAACCGAT
TTCGTTCACA TGCTTCTCAA GAAACGCCTC TTTTCCTCGC CCATGGCTTT CGCGCTCACG
CTGGCGAAAC ATCGGGACAC TCTCGAACGA GGCAAGCCAA AAGGCGATCG CGACACCATG
GACGATCGCA TTCTGCGCAA GGCGATCCTG AAAACCGAAG AGGAATATTC GGACGATTCA
CTGGTTGAAG AAGCCCAGCA CGAAGCGGTC GAGGTGGTGG GCGAACTCGC GCCACCTCTG
TCACGCGAGC AGAGAGACAT GCTCGACCGT CTCTCCGCAT GGGGGGAGAA AGCACGCAAC
CGCGTCGACT CGAAAGCCAA GGCCATTCTC GACTGGCTCG AGAGCCATCT GAAGACGGAT
GGACGCTGGA ACGGAAAACG AGTGATTCTG TTCACCGAAT ACCGGGCCAC CCATTCGTGG
CTCCATCAGA TTCTCACCGC CAACGGCTAT GGCGGCGATC GCTTGATGTA CCTGCACGGA
AGCATGCTGC CGGACGAGCG CGAATCGGTC AAAGCCGCGT TCCAGGCGCA TCCGGACATT
TCACCGGTTC GCATCCTGCT CGCGACCGAC GCGGCCTCGG AAGGTATCGA CCTCCAGAAC
CACTGTAACT ACCTCATCCA TGTCGAGATT CCGTGGAACC CCAATGTCAT GGAACAGCGC
AACGGCCGTA TCGACCGACA CGGGCAGAAG GAAGACTCCG TCTTCATCTG GCATCCGGTG
GGGAAAGGTT TCTCCGCGAG ATCTGCCGAC AGATCCGTCA AACCCGGCGA TGTCGCGGGC
GATCACGAGT ATTTGATGCG TGCCGTCCTC AAGATCGACA CGATCCGGGA GGACCTCGGC
AGCGTCGGAC CGGTCATCGC CCGGCAGATC GAAGAAGCCA TGCTCGGCAG GCGTAGCGGC
CTGGATACCG CCTCGGCGGA AGCCAAGGCC GCCAAGGCGA GGAAGTTCGT CACGGCGGAA
AAGCGTCTTC AGGAGCGCAT CGCCCGCCTG CACGAGAGAC TCATGGAAGC GAAGAACGAT
TTCCATTTGT CGCCCGAGCA CATTTCGCGT GCGGTCGAGG TCGCTTTGGA TCTGGCGGAA
AAGCCGTCGC TCAAGCCCAC CGGATCGACC CACGGCGAAA AGGGAAGCGT TTTCGAAGTG
CCCGTCCTCC CCGGTTCCTG GGGCAGAGCC ACCGTCGGAC TGGAACACCC CCATACCGGC
GTTCGCCGCC CGATCACCTT CGACCACGAT GTCGCCAAAG GTAGAGACGA TGTCGTCCTG
GCCCATCTCA ACCACCGGTT GGTGCAGATG TGTCTGCGCC TGCTTCGGGA GGAGATCTGG
AAGCTCGACG ACGTCAAGCG ACTTCACCGC GTGGCGGTCC GAACCGTGCC CGACAGTGAA
TTGCGAGTCC CGGCGGTGGC GGTCTGGTCG CGCTTGGTGA TCACCGGCGG AGACCACCAT
CGCCTTCACG AAGAGCTGAC CCTCGCCGGT GGCGAACTCG AACACAAACG GTTCGCCCGG
ATTTCCCAGG TCGGCAAACT GGAAGCTCTG GTCGCCCAAG GTTCGCCTAT CGAACCCGAC
CAGGCGCTGT TCGACGTTCT GAAGGACAGG TTCGAGCGCC ACGAAGACGC TCTCATGGCC
GCTGTCGAAG CGAGATCCAG GGACCGCTTG AAGTTTCTCG AGAACACCCT CGACCGGCGC
ATGAAAAGCG AAATCGCCGA TGTCCGAACC GTTCTGGACG AACTTGAGGC CAGCATCCGC
AAGGAGCTGA AGTCGGATCG CCAAGGCGGC CAGCTCTATC TGCCCGGGTT CTCGCCCGAG
GAGATGGCGC AGGTGAAGAA AGACGTCCAT GCCCTGGAAG CCCGTTTGGC TCGGATTCCG
GAAGAGCGGG AGGAAGAAAA GGCCGCGATC GAAAAACACT ACGCCAAGCC GGTGGATCGA
ACGTTCCCGG TGGCCGTCGT GTTCCTCGTT CCGCAATCAC AGGCAAGGAG GGGCTGA
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| Protein sequence | MTTTNASSAN GVVRFGAVPE PGQLVEVRRR QWVVTDVSSG ALSPASSGDQ HLVGLSSLDE
DSMGEEIQVV WQMEAGAQVL EKAGLPSITG WDSDDRLEAF LDAVRWGAVT NADRSFLQSP
FRSGITIEDY QLDPLVRAVE MARVNLLIAD DVGLGKTIEA GLVIQELLVR HRARTVFVVC
PASLQVKWQT EMQEKFGLEF RIVDTEYIKR LRRERGIHVN PWTSYPRLVT SMDWMKSGEG
FRLLKDVLPP HITYPRKFDI LVVDEAHNVA PASASMYALE SQRTRLVRSL APHFTHRLFL
SATPHNGYQE SFTSLLELLD DQRFARTVMP DEKQLHRVMV RRLKSDIVDA NGTPVFPVRK
LEGLEIDYAE EERQIHALLG KYTADRSKSV KGTRFEYGTD FVHMLLKKRL FSSPMAFALT
LAKHRDTLER GKPKGDRDTM DDRILRKAIL KTEEEYSDDS LVEEAQHEAV EVVGELAPPL
SREQRDMLDR LSAWGEKARN RVDSKAKAIL DWLESHLKTD GRWNGKRVIL FTEYRATHSW
LHQILTANGY GGDRLMYLHG SMLPDERESV KAAFQAHPDI SPVRILLATD AASEGIDLQN
HCNYLIHVEI PWNPNVMEQR NGRIDRHGQK EDSVFIWHPV GKGFSARSAD RSVKPGDVAG
DHEYLMRAVL KIDTIREDLG SVGPVIARQI EEAMLGRRSG LDTASAEAKA AKARKFVTAE
KRLQERIARL HERLMEAKND FHLSPEHISR AVEVALDLAE KPSLKPTGST HGEKGSVFEV
PVLPGSWGRA TVGLEHPHTG VRRPITFDHD VAKGRDDVVL AHLNHRLVQM CLRLLREEIW
KLDDVKRLHR VAVRTVPDSE LRVPAVAVWS RLVITGGDHH RLHEELTLAG GELEHKRFAR
ISQVGKLEAL VAQGSPIEPD QALFDVLKDR FERHEDALMA AVEARSRDRL KFLENTLDRR
MKSEIADVRT VLDELEASIR KELKSDRQGG QLYLPGFSPE EMAQVKKDVH ALEARLARIP
EEREEEKAAI EKHYAKPVDR TFPVAVVFLV PQSQARRG
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