| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_3790 |
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| Symbol | |
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| ID | 4457890 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Syntrophobacter fumaroxidans MPOB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008554 |
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| Strand | + |
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| Start bp | 4636589 |
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| End bp | 4639900 |
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| Gene Length | 3312 bp |
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| Protein Length | 1103 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 639704563 |
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| Product | DNA primase catalytic core |
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| Protein accession | YP_847894 |
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| Protein GI | 116751207 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0358] DNA primase (bacterial type) |
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| TIGRFAM ID | [TIGR01391] DNA primase, catalytic core |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.443954 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCATGG GCGGAACGGA TAACGTCAGG GAGTATTACC GGCTCGTCAC CGAGATGGAC
ATCGGTGACG TGGCCCGGGA ACTCCTGCCG GGACGGATCA CCCAGGAGAC CGGCCAGCGC
TTGATGTGCG ACTGCCCCAA CCATCAGAGC CAGTCGCGCC TGTCGCTGCA CGTGATGCTC
GACAAGCAGG GCTGGTACTG CTTCGGCTGC GGGGTTGGCG GCGATGTGCT GCAGCTCGTG
GAGTTCATTC AGACGGGCTC GGTCACCGCC GGGCAATCGG GTCCGATGCC GGACAGCCAC
CGCCAGGCCC GGGACTATCT CGCCAAAAAG GCGGGCTTGC CGCCACTGTC GCGCTATGGC
CTGAGCCAGG AGCGTCTGGC TCAGACGGAG GCGGACCGCG CCTTCGAGCT GCGGGTCAAG
GACGCGCTGA CGGCGCTGGC CAGGCTTTAC CACGCCAGAC TCAAGGAGTC GCCGGAGGTC
CTCGACTGGC TGAAATCAAA ATATGCCCTG AGCGAGAAAA CCATCGACGA TCTCCTGATC
GGCTATGCGG ACAACGCGTC CGGCGCGGTC GCCCAACTGA CCGGAGGTGA AGACGGCTTC
TCCAAGCGAG AGCTCGCCGC CACCGGCGCT TTCAGGCCCA CCAGCCAGGA CGGGCTGACG
CCATTTTTCG AGCGCCGCAT CGTCTTTCCT TACTGGAGCC GTGGCCGGGT GGTGTTCATG
ATCGGCCGCA AGACGCCGTG GACCCCGGAC GTGGGCTGGG AGCAAGGGAA ATACAAGAAG
CTGCCGGTTC ACGACGAGCA CCAGCGGCCC TACGTCGCCG ACTTCATCAA CAACGCGCTG
CTGTTCAACG AGGACTGTCT GCTGGCAAGG CCCGGCAAGG TCATCATCAC CGAGGGGGTG
ACCGATTGCC TGGCGCTGAT GCAACTGGGA CTGCCCACCG TGTCGCCGGT CACCGTCCGC
ATCCGGGCCG CCGATTGGGA GCGCCTGATC CCCAAGCTGC GCGGCGTCGA AACCGTCTAC
ATCTGCCAGG ACAACGAACT TTCCCAGGCC GGTCTCAAGG GGGCGCTGCA AACCGCCCGC
ACCCTGGCCG AACACAAGAT CGACACCCGT CTGGTAACGC TGCCTCTGTC GGAGACACAA
ATCTCGGCCC GGCAGGAGCT GACCGAACGC TTCGGCCTGA CGGCGAGCGT GGGGCCGAAG
GAGCTGGCCA AGCTGCTGGC GGGACGGCCC GCCGAAGAGA TTCAGGCGGC CGAGGCGCTT
CTCGCCACCG CCAAGATCGA CGTCAACGAT TACATTGCCG CCGGGCATAC CCGGGAGGAT
TTCGAACGTC TGCTCGCCGA AGCCAGCACG CCCATCGAGT TCGGCGTGCG CTCGCTACCC
GAGGGCGCTG AAGAGGAGGA ACGCAACCGC CTGCTCGAAC CGATCCTTGG AGAGATTTCC
GAGCAGTCGC CGCTGGAACA GGCCCGTCTG CTGAAGCTGG TGCAGGAGCG CATCGGCGGT
GGTGTTTCCA TGGCCACCCT GAAGGAACAG ATCCGCGCCA TCCAGAAGGA CCGCAAGGTA
GAGTTCCGCA ACGAAAAGAA GAAGGCCAAG CGGATGTCCG GCGCGATGCC CGGATCATGC
CGCGCCCGGG TCGACGAGGT GCTGATCGAC ACGGAGCTGG AGAACGGAGC TCCTGATTAC
ACCCTGGCCG CCGAGGCCGC CTACGACTGG TTCAACGCCA ACGGTGCCCA GTTCTTTCAC
ACCCTGCAGG GCGAGCCGTT CATGTATTTC GATAACGCCA TCTATTGGAT GGATTCGCCG
GACCGGGGCC GCAAGCGCCA CTACGCGGCC ATGCTCTACA AGCACACGGG CATGGTGCCG
ACCACGGGCG GCGGACGGAC ATTTTTCGAG GTGCTGCCCA GTCTGGCCAT GATCCGTGGC
CAGGTGCGCG ACCATTTCTC CTGGCTGCAC ACCGATGTGG CCTCCTACAC CGTCTATTTC
AATCTGAACA ATCCGGAGCA CGAGATCGCC AAGATCACCC CGGACGAGAT TCAGATCATG
AAAAACGGCG GCAACGAGGA TGGCATCATC CTGGACGGCT CGCGGAAGAT GAAGCCGCTG
AAATTCCTGC CCGACGCCGA CCTCGAAGAG GCGGACCGGC TCCTGGTCGA TCTGCTGGTG
GGCAACATGA CCTGTCCGCA GGGGGATCGC TTTCTCATCC TTTCCTGGCT CTCCTGCTTC
CTGCTGATCG ATTTCGCCGG GACGCGGCCC ATGACCCGCT TCGAGGGCTC GGCCGGATCG
GGCAAGACTA CCGCCAGCAA GATCACGTCG ACGCTGCTTT ACGGCGAGCC CCAGCACAAG
AAGGCCACCG ACGCGGCGAA CTACACCGAT GGCTCGCAGA ACCCGCTCAT CGTCCTCGAC
AACATCGAGG TCAAGCAGAT GACCGAGGAC CTGACCACCT TCATGCTGAC CAGCATCACC
GGCATCGCCA AGGAGAAACG CAAGAGCGGC ACCGACAGCG AGACCATCAC GGAGCGGACC
AAATGCCTGC TGAACACCAC CGGCATCGAG CCGCTGTGCG GGGAGCTTTC GGAGATCCTG
TCGAGGTCCT TCGTCATCAA CTTCGACCTC GCCAACCAGG CCAGCGACTG TTTTCTGGAA
TCGGAGGTCA TCTCCGCCAT CCAGCAGAAC CGGGATCTGA TCATCTCGGC CATCATGAAG
CGGACCAGCC ATGTGCTGGC GATGATCCGG GACGGAGCCC AGAAGCAGGT CATGCGCCTG
CTGCACCGAA CCATGCCGAC CCATGGCAAA CGCCGGTGCA ACGACTATCT GAGCCTGATG
TACCTGATGA TGCTGGCCGG GTCCGAGGAA CACGAGGTGA CCACCGGACT CGAGGAGCTG
AGCCCACTGT TCATCGAGCA GATCCATTCC ATCAACGACA CCAGCCAGGA GATGGCGCGG
GAGTCGAACC CCATCGCAAC GGCGCTGGCG TCACTATTTC ACGCTTATCG GAACGCGGTG
GAGCTGGACG AGAAGGCCCG CTACGGCGAG GACGACCGGG CAAACCACGT CGTCGGGTTC
ATCGAACGCT ACCAGGTGAG GTTCGAGAAC GAGAACACCA TGGAACCGGT ATCGGCGGGA
CGGCTGCTCG CGGCGCTGCG TAGGGTCGGC CGGGAATTCA ACCTCGAGTT CGAATACAAA
AAACCCGCCC AGCTCGGTCG GCGCATCAGC AACGACCTGG ACGTCATCCG GGACGCCGGG
TTCGACATCG ACCGGCAGCG CAACGCCCAC ACCAAGAACT TCGAGTACCG CATCGGTTGC
AGAGGTGTTT AA
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| Protein sequence | MSMGGTDNVR EYYRLVTEMD IGDVARELLP GRITQETGQR LMCDCPNHQS QSRLSLHVML
DKQGWYCFGC GVGGDVLQLV EFIQTGSVTA GQSGPMPDSH RQARDYLAKK AGLPPLSRYG
LSQERLAQTE ADRAFELRVK DALTALARLY HARLKESPEV LDWLKSKYAL SEKTIDDLLI
GYADNASGAV AQLTGGEDGF SKRELAATGA FRPTSQDGLT PFFERRIVFP YWSRGRVVFM
IGRKTPWTPD VGWEQGKYKK LPVHDEHQRP YVADFINNAL LFNEDCLLAR PGKVIITEGV
TDCLALMQLG LPTVSPVTVR IRAADWERLI PKLRGVETVY ICQDNELSQA GLKGALQTAR
TLAEHKIDTR LVTLPLSETQ ISARQELTER FGLTASVGPK ELAKLLAGRP AEEIQAAEAL
LATAKIDVND YIAAGHTRED FERLLAEAST PIEFGVRSLP EGAEEEERNR LLEPILGEIS
EQSPLEQARL LKLVQERIGG GVSMATLKEQ IRAIQKDRKV EFRNEKKKAK RMSGAMPGSC
RARVDEVLID TELENGAPDY TLAAEAAYDW FNANGAQFFH TLQGEPFMYF DNAIYWMDSP
DRGRKRHYAA MLYKHTGMVP TTGGGRTFFE VLPSLAMIRG QVRDHFSWLH TDVASYTVYF
NLNNPEHEIA KITPDEIQIM KNGGNEDGII LDGSRKMKPL KFLPDADLEE ADRLLVDLLV
GNMTCPQGDR FLILSWLSCF LLIDFAGTRP MTRFEGSAGS GKTTASKITS TLLYGEPQHK
KATDAANYTD GSQNPLIVLD NIEVKQMTED LTTFMLTSIT GIAKEKRKSG TDSETITERT
KCLLNTTGIE PLCGELSEIL SRSFVINFDL ANQASDCFLE SEVISAIQQN RDLIISAIMK
RTSHVLAMIR DGAQKQVMRL LHRTMPTHGK RRCNDYLSLM YLMMLAGSEE HEVTTGLEEL
SPLFIEQIHS INDTSQEMAR ESNPIATALA SLFHAYRNAV ELDEKARYGE DDRANHVVGF
IERYQVRFEN ENTMEPVSAG RLLAALRRVG REFNLEFEYK KPAQLGRRIS NDLDVIRDAG
FDIDRQRNAH TKNFEYRIGC RGV
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