| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_3785 |
|---|
| Symbol | |
|---|
| ID | 4457885 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Syntrophobacter fumaroxidans MPOB |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008554 |
|---|
| Strand | + |
|---|
| Start bp | 4631631 |
|---|
| End bp | 4632647 |
|---|
| Gene Length | 1017 bp |
|---|
| Protein Length | 338 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 639704558 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_847889 |
|---|
| Protein GI | 116751202 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.613238 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.376991 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGAGC TGATGACCAC CACCTATTCC ATGTGGCGGC TGTTCCGCAA CTGCCGCATG
GCCTGCAAGT GGCGCTATAT CGACGAGCTG GTACCACTCG AGCGCGACCC CAATCTGGCC
TTCGGCTCGG TCATTCACGA CTGCCTGGAG TGCTGGCACG GCGAGCGGGA TCTGGCCAAG
GTCCTCGACC ACATCGACCG GACATATCCG AACCGGGCGC AGGACGATCA TCAACAGGCC
GACTGGCATC TCGCCCGAGC CATGATGAGC GCCTATGCGG AACACTACCC GGCCGAAGAA
TTCGAGGTCG TCGCGCTCGA AAAGACCTTC GAAGGTCCCA TCGTCAACCC GGCGACAGGC
GCGACCTCGC GCAGTTTCAT TCTCGCCGGA AAGGTGGACG GCATCGTCCG TCAAGATGGT
CAGCATTTCC TGCTGGAACA CAAAACCGCT TCACAGATCG ACGCCAGCTA CCTGGAGCGG
CTGTGGACCG ATTTCCAGAT CATCCTCTAC GCCTGGTACC TGGAGCAGAC CCTCGGCATC
ACGGTCAGCG GCATCATCTA CAACGTTCTG GTCAAGGCCA AGCTGCGCCA GGGCAAGGGT
GAGACCGAGG CCGAATTCGA GGCCCGCCGG GCGGAGCTGC TCGCCAAGTC GAAAACCGGC
AAGAGCAGCG CCAAGCGCAA GCTGCCGGAG GACGACGACA CCTTCCAGCA GCGGCTCCAG
GAGAAGTACC TCGAGCCGGG CATGTTCCAT CGCGAGGTGC TCTACATCTC CCGAGACCAG
TTCGAGGAAC TGCGGGCGGA GCTGTGGGAA CTCTCCAAGG CCATGCTCGA CGCCCGTCGG
CGCGACACCT TCTACCGCAA CACCAGCTAC TGCTTCCAGT ACGGAAGACC CTGCGCCTAC
TTCCAGCTCT GCCGCTCGGG CGGCAACCCC AACGTCATCG AAAACCATTT CCAACGGATC
GCCCCGCACG AAGAGCTGCG GGACGGAGCC GGTGAAGACG CCGCTCCGGT GTTTTGA
|
|---|
| Protein sequence | MSELMTTTYS MWRLFRNCRM ACKWRYIDEL VPLERDPNLA FGSVIHDCLE CWHGERDLAK
VLDHIDRTYP NRAQDDHQQA DWHLARAMMS AYAEHYPAEE FEVVALEKTF EGPIVNPATG
ATSRSFILAG KVDGIVRQDG QHFLLEHKTA SQIDASYLER LWTDFQIILY AWYLEQTLGI
TVSGIIYNVL VKAKLRQGKG ETEAEFEARR AELLAKSKTG KSSAKRKLPE DDDTFQQRLQ
EKYLEPGMFH REVLYISRDQ FEELRAELWE LSKAMLDARR RDTFYRNTSY CFQYGRPCAY
FQLCRSGGNP NVIENHFQRI APHEELRDGA GEDAAPVF
|
|---|
| |