Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfum_3745 |
Symbol | |
ID | 4457912 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Syntrophobacter fumaroxidans MPOB |
Kingdom | Bacteria |
Replicon accession | NC_008554 |
Strand | + |
Start bp | 4576271 |
End bp | 4578937 |
Gene Length | 2667 bp |
Protein Length | 888 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 639704519 |
Product | surface antigen (D15) |
Protein accession | YP_847850 |
Protein GI | 116751163 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG4775] Outer membrane protein/protective antigen OMA87 |
TIGRFAM ID | [TIGR03303] outer membrane protein assembly complex, YaeT protein |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTGAGCG ACAAATACGT CAAGAGGGTA CTACTGGTCC TTGCGGCTGT ATTCACGATG GCTTGGGGGG CACACGCCCA GGAGCAGAAT CCGAGAGTCG CCATACTTCC TTTCGTCGTT CACAGTCCGA AAGATCAGGC TTCGATCCAG AAATCCGTGG AGGAAACTCT GGTCCGCATC GCCGCCACCG AAGGCGTGAA AGTTGTCGAC TCCGCGGAAG TCCGCAAGGT CGTCAAACCG GGCGAAGCCC CGCGCACCGA AGAGCAGGCG CGGGCCCTGG GGCGCAGACT GGGGGCCGGT TACGTTCTGT TCGGCAGCTT CAATATGCTC GGCAACACCA TCAGTCTCGA TGCAAAGCTG AGCGATGTGT CCGGGCAGAA AAGGACGGCG AATCTGTTCG CCGAGGAAAA GGGAATCGAA AACCTGGCGG CGGCGAGCAG CCGGATCGTG CAGCAGATGA CCATGGCAGC GACGTCCAAG GGCGTCATCG CGGATATCAA GGTCCGGGGC AACGACCGGA TTGAAGCCGA TGCCATCAAG GCCGCCGTCA AGAGCAAGAA GGGGGAAGGG ATCCGCCCCG GGCAGGTTCG GGAGGACATC AGGGCCATCT ACAAGCTGGG GTATTTCGAA AAGGTCGACG TGGAGGAATC GGATTCGCCC GCCGGCAAGG TCCTGACTTT CGTCGTTCAG GAAAATCCCA CCGTCCAGGA AGTGCGCATC GCGGGGAACA AGAAGATCAA GGAGAAGGAC ATCCTGGCGG CCATCGGCAC CAAGGCGTAT ACGATCCTTC AGGAGACCAC GGTGACCGAA GACGTCCAGA AGATCCTCAA GCTTTACCAG CAGAAGGGCT ACTTCGCCGC GGACGTGAAG TCGTCGATCA CCTTCCCGAA GGATCCCCGA AAAGCAACGG TCGCTTTCGA CATCAAAGAG CACAAGAAAA TCTGGATCAA GAAAATCAAC TTTCGCGGAA ACACTCACAT CTCCGCGCGG AAATTGCGCG GGGTGATGCA GACCAAAAAG AAGATGTTCC TCATTTCCAT GATCTCCGAA CGCGGGATTC TCCAGAAGGA AGTGTTGGAT ACCGATGTCG ACCGCCTCAC CGTCTTTTAC CACGATGAGG GGTATATGGA CGCGAAGGTG GGCACTCCCG AGGTGGTTCG CAAGGACGAC GGGTTTTATA TCGAAATTCC AATCGAGGAA GGGGCGCGAT ACAAGGTCTC GTCGGTGAAG CTGAGCGGGG ATATGATCGA AGGCACCCCC GCCATGGAAA AAAAGATGGA CGTGCGCGTG AAGGACCACT TCAGCCGGGA GAAAGTCAGG CATGACATGG ACCTGATTTC CAAGACCTAT ATGGACGACG GCTACGCGCA CACGGAGGTC GACCCCGCCA TCCAGCGGGA TACCGGCACC AAGACGAGCG ATATCGAGTT CAGAATAAAG AAAAACGAGC AGGTGCACAT CGGAAGGATT TTTATCACGG GCAATACCAG GACCCGCGAT TACGTGATTC GGCGCGAGCT GAAGATTTTC GAAGGGGATA TGTTCAGCGC CAGCAAGATA GAGAAGAGCC TCTCCCGGCT GAAGAAGCTG GATTATTTCG AAGATGTGCA GATCGTGCCG CTCGATACGG AAACGTCCAG CGTCATGAAC CTCCAGGTCA AGGTCAAGGA GAAGCTGACC GGGTCGATCA GCGTGGGCGG CGGCTTCTCG TCCGACGACG GTTTGTTCGC CAGCGGCGCG GTCATGGAGC GGAACCTCTT CGGGCGGGGC CAGACGATCG GCGTCAAGGC CTACTTCGGG GAGGAGGCGC AGCGCTACAT CTTCAGTTTC ACCGAACCAT GGTTGTTCGG CTACCAGGTG GCCGGGGGCA TCGATCTGTA CAACTGGCTG CGCGATTACG ACACTTTCGT CAAGGATTCC ACCGGATTCA GGCTTCGCAC CGCCTATCCG TTCGGTCAGT ACAGCCGGCT GCTGGCGTAC TACTCCTGGG AAAGAGCGCA CGTGACCGAT GTGAGCGTCG ATGACCCGTA TATCCAATCG CAGGTCGGGT GGACCACTCT GAGCGCGTTC ACCCTGGGAT TCGAAAGAGA CACCACCGAT CATCCGTTCC TGCCGACCAA GGGAACCGTC CTCGCGGCGA CCGGCCAGTA CGCCAGCCCG GCTTTCGGCA GTGACAGCAA CTTCTTGAAA TATGAAATGC ACGCGGGTGT GTACGTCCCG CTGCATGTCT GGAAATTCAT CGGGTTTCTG CGCGGCGAAT ACGGGTATCT CTATCAGATC GATCCCGTTG ACAATCCGGT TCCCATCTAT GAAAGATTTT TCCTGGGAGG CATCAACAAC CTGCGCGGTT TCAACTGGGG GGATGTCGGC CCCCGGGATG CCTACGGGAA TGTCGTCGGC GGTGTGAAGT ACGGAGTGAT GACCGCGGAG TTGCTTTTTC CCATAGCCGA GAAGATGGGG ATTCGCGGAG TGGTCTTCTT CGACGCCGGA AATGCGTTTA CCGGAGACCA GAGTTTTGAT GTCTCCAAGT TTCGGACCGA CGCCGGTGCC GGTATCAGGT GGAACTCTCC ATTCGGACCG CTCAGGATGG AAATCGGTAT AAACCTCGAT CCAGAACCGG GTGAAGACAA TTACCAATGG CAGTTTTCAG CAGGTGCTTT TTTCTAA
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Protein sequence | MVSDKYVKRV LLVLAAVFTM AWGAHAQEQN PRVAILPFVV HSPKDQASIQ KSVEETLVRI AATEGVKVVD SAEVRKVVKP GEAPRTEEQA RALGRRLGAG YVLFGSFNML GNTISLDAKL SDVSGQKRTA NLFAEEKGIE NLAAASSRIV QQMTMAATSK GVIADIKVRG NDRIEADAIK AAVKSKKGEG IRPGQVREDI RAIYKLGYFE KVDVEESDSP AGKVLTFVVQ ENPTVQEVRI AGNKKIKEKD ILAAIGTKAY TILQETTVTE DVQKILKLYQ QKGYFAADVK SSITFPKDPR KATVAFDIKE HKKIWIKKIN FRGNTHISAR KLRGVMQTKK KMFLISMISE RGILQKEVLD TDVDRLTVFY HDEGYMDAKV GTPEVVRKDD GFYIEIPIEE GARYKVSSVK LSGDMIEGTP AMEKKMDVRV KDHFSREKVR HDMDLISKTY MDDGYAHTEV DPAIQRDTGT KTSDIEFRIK KNEQVHIGRI FITGNTRTRD YVIRRELKIF EGDMFSASKI EKSLSRLKKL DYFEDVQIVP LDTETSSVMN LQVKVKEKLT GSISVGGGFS SDDGLFASGA VMERNLFGRG QTIGVKAYFG EEAQRYIFSF TEPWLFGYQV AGGIDLYNWL RDYDTFVKDS TGFRLRTAYP FGQYSRLLAY YSWERAHVTD VSVDDPYIQS QVGWTTLSAF TLGFERDTTD HPFLPTKGTV LAATGQYASP AFGSDSNFLK YEMHAGVYVP LHVWKFIGFL RGEYGYLYQI DPVDNPVPIY ERFFLGGINN LRGFNWGDVG PRDAYGNVVG GVKYGVMTAE LLFPIAEKMG IRGVVFFDAG NAFTGDQSFD VSKFRTDAGA GIRWNSPFGP LRMEIGINLD PEPGEDNYQW QFSAGAFF
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