| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_3724 |
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| Symbol | |
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| ID | 4457976 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Syntrophobacter fumaroxidans MPOB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008554 |
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| Strand | - |
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| Start bp | 4540264 |
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| End bp | 4542162 |
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| Gene Length | 1899 bp |
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| Protein Length | 632 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 639704497 |
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| Product | phospho-2-dehydro-3-deoxyheptonate aldolase |
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| Protein accession | YP_847829 |
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| Protein GI | 116751142 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0077] Prephenate dehydratase
[COG2876] 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase |
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| TIGRFAM ID | [TIGR01361] phospho-2-dehydro-3-deoxyheptonate aldolase
[TIGR01362] 3-deoxy-8-phosphooctulonate synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGATTCTTA TCCTGAAAAA GAAGGCAACC GCTGAACAGA TGGAAAGGCT CAAGGATGTC
CTGCGCTCCG AGGGATACCT GGTGAAGGAG ATCGCCGGCG TGGACGAGAA GATCCTGGGC
GTCGTGGGCA CGATGTACAA GGAGACGGCC TTCTATGAAT CCCTGCCCGG GGTGGAGCGG
GCGGTCCCCA TCTCCAAGCC GTACAAGCTG GTGAGCCGCG AGCTCCATCC CGCCCCGTCG
GTCATCAAGG TTGGCGACGT CACCATCGGC GGAGACCGGC TGGTGGTGAT CGCCGGTCCC
TGCGGTGTCG AGGACCGGAA GAGGACCCTG GATATCGCGC GCACGGTTCG CAAACACGGA
GCGGTCCTGT TCCGGGGCGG TGCGTTCAAG CCCCGCACCT CGCCCTACTC GTTCCAGGGC
CTGGGTGAGG AGGGCTTGAA GATTCTGCGG GAAGTGAGAG AGGAAACCGG CCTCGGAGTG
GTCACGGAGA TCACCTCTCC CAGCCAGGCG GACCTCATGG TGAAGTACGT GGACGTCGTC
CAGGTCGGCG CCCGCAACAT GCAGAACTTC GAGCTCCTGA AGTCGGTCGG CCGAATCGGC
AAGCCGGTGC TCCTCAAGCG CGGGCTGTCG GCGACCATCG AGGAATGGCT CATGTCGGCC
GAGTACGTGC TTTCCGAAGG AAACGACCAG GTCATTCTGT GCGAGCGGGG CATCCGGACG
TTCGAGCGCT ACACGCGAAA CACCCTGGAC CTCACGGCCG TTCCGGTCAT CAAGAAACTC
ACCCACCTCC CGATCATCGT CGATCCGAGC CACGCCACGG GGATCCGGGA AAAGGTCAGC
CCCATGGCCC GCGCGTCCAT CGCGGCGGGA GCCGACGGGC TGATCATCGA GGTTCACACG
GAACCCGACA AGGCACTCTC CGATGGTCCC CAGAGCCTCT ATCCCGAACA GTTCGAGCAG
CTCATGCGCG ACCTCTACGT CATCGCCCCG GTGGTGGGAA AGCAGGTCGA CTACGCCTAC
CTCGACAAGG CGGCCATCAT GAAGCCTCGC AAGGGCAAAG GCAAGGCGGC CCCGATGGTC
GTCTACAGCG GCGTCCCGGG TTCCTTTTCG CACAAGGCGT GTCTGCAGTT CTTCGGAACG
GAGGTCCCGA TCCGGGAATG CACATGCTTC AGGGAGGTTT TCGACTCCGT GGCCGGCGAA
CAGGCCGCCT TCGGCGTCAT CCCCGTGGAG AACAGCCTTA CCGGGAGCAT TCACGAAAAC
TACGACCTGC TCCTCGAATA CGCTATCATG ATCGTCGGGG AACTGACCCT GCGCATCAAG
CACAACCTTC TGGGACACCT GGACTCCTCC ATCGAGGGAA TCGAACGCGT ATACTCGCAT
CCCCAGGTAT TCCAGCAGTG CCGCGAGTAC CTGGACAAGC ATCCCGCGTG GGATCAGATT
GCGTGCAAGG ACACGGCCAG CGCCGTGCGC AAGGTGGAAG AAGCCGGCGA TGCGAAAGAA
GCCGCCATCG CCGGAGTCGG TGCGGTTCAA ACCCGGCGGA TGACGGTGCT CAAGGAAAGC
ATCGAAACCA ATCCCCGGAA TTTCACCCGG TTTGTGGTCA TTTCGAAAAA CGAGTCGCTG
CCCGGGCCCA AGAACAAGTC CTCCCTGATC TATTCGGTAA GCGACAAGCC GGGCGCTCTC
TTCGAGACGC TGCGCATCTT CGCGGAGAAC AATATCAACC TGGTCAAGCT GGAATCCCGG
CCCATCCACA GCAGGCCCTG GGAGTACCTG TTCTATGCGG ATCTCGAGGT CGACGTCACG
GAAGACGGCC GCAGGCACAT CCTCGAAGGG CTCATGAGCA AAACCGAATT CTTCAAGTTT
CTCGGCAGCT ACCAGAAGGG GACCGAAGTG AGTCATTAG
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| Protein sequence | MILILKKKAT AEQMERLKDV LRSEGYLVKE IAGVDEKILG VVGTMYKETA FYESLPGVER
AVPISKPYKL VSRELHPAPS VIKVGDVTIG GDRLVVIAGP CGVEDRKRTL DIARTVRKHG
AVLFRGGAFK PRTSPYSFQG LGEEGLKILR EVREETGLGV VTEITSPSQA DLMVKYVDVV
QVGARNMQNF ELLKSVGRIG KPVLLKRGLS ATIEEWLMSA EYVLSEGNDQ VILCERGIRT
FERYTRNTLD LTAVPVIKKL THLPIIVDPS HATGIREKVS PMARASIAAG ADGLIIEVHT
EPDKALSDGP QSLYPEQFEQ LMRDLYVIAP VVGKQVDYAY LDKAAIMKPR KGKGKAAPMV
VYSGVPGSFS HKACLQFFGT EVPIRECTCF REVFDSVAGE QAAFGVIPVE NSLTGSIHEN
YDLLLEYAIM IVGELTLRIK HNLLGHLDSS IEGIERVYSH PQVFQQCREY LDKHPAWDQI
ACKDTASAVR KVEEAGDAKE AAIAGVGAVQ TRRMTVLKES IETNPRNFTR FVVISKNESL
PGPKNKSSLI YSVSDKPGAL FETLRIFAEN NINLVKLESR PIHSRPWEYL FYADLEVDVT
EDGRRHILEG LMSKTEFFKF LGSYQKGTEV SH
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