Gene Sfum_3711 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_3711 
Symbol 
ID4457963 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp4527784 
End bp4528497 
Gene Length714 bp 
Protein Length237 aa 
Translation table11 
GC content63% 
IMG OID639704484 
Productdethiobiotin synthase 
Protein accessionYP_847816 
Protein GI116751129 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0132] Dethiobiotin synthetase 
TIGRFAM ID[TIGR00347] dethiobiotin synthase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00204232 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGAGAAC CCAACCGGAA TCGCGGTAGC ATTTTCGTCA CCGGAACCGA CACGGGAGTG 
GGCAAGACCG TGCTTTCGCT CCTCCTGATG CGATTCTTCC TGATGAGAGG GAGGACTCCT
TTCTACCTCA AGCCGATTCA GACCGGATGC GTCGACGCGC ATGACCGCGA CAGCGACGCG
CGGTTCATCT ACGAGCACGT GCCGGCGCTG GCCGGAAAAG ATCCGGGCGA TTCGGTCGTA
TACTGTTTCA GGAGTCCCAA GGCCCCCTGG TTTGCCTCCG GACACGAGGC GGAAGCGATC
GATCCCCGGA AAATCGCCGC TTACGCGGAG CGCAAAAGGT CCGCCCATTC GCACATCGTG
CTGGAAGGGG CCGGCGGGCT GTTCGTACCG GTCACCGAAG ACGTTCTGAT GATCGACCTG
ATCGCCCTGT TGAACGCCAG GCCGATCCTT GCCGCGCGCG CCGGCCTCGG CACCATCAAC
CACACGATCC TTGCCGTGGA GGCGCTGAAA GCCCGGAGGC TGGACCCTCT CGGCATCGTG
TTCATCGATT CCGGACCCAT GGAAACCCCG GAGCAAATGG TCGCGGAAAA CATCGAAGCG
GTCGAACGTT TCTCCGGGGT GAAAGTGGCC GGAACGATCG GGAGAATCGA GCGGTGGTCG
GAGCCGGGCC AGGAGTGCTA CCGGCCGCTT GCGAGGCTGT TCGGCGAACG CTGA
 
Protein sequence
MREPNRNRGS IFVTGTDTGV GKTVLSLLLM RFFLMRGRTP FYLKPIQTGC VDAHDRDSDA 
RFIYEHVPAL AGKDPGDSVV YCFRSPKAPW FASGHEAEAI DPRKIAAYAE RKRSAHSHIV
LEGAGGLFVP VTEDVLMIDL IALLNARPIL AARAGLGTIN HTILAVEALK ARRLDPLGIV
FIDSGPMETP EQMVAENIEA VERFSGVKVA GTIGRIERWS EPGQECYRPL ARLFGER