Gene Sfum_3704 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_3704 
Symbol 
ID4457991 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp4519716 
End bp4520552 
Gene Length837 bp 
Protein Length278 aa 
Translation table11 
GC content60% 
IMG OID639704477 
ProductABC transporter related 
Protein accessionYP_847809 
Protein GI116751122 
COG category[H] Coenzyme transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG1120] ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.591184 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGGCCAA TGGAGCTGAT ACGGGCGGAT GGAATCACCT TCAGCTATTC ACGTTCACCG 
GTTTTGCACA ACGTATCTCT TTCAGTTCGA AAAGGAGAGA TCGTCTCTTT GCTGGGGCCC
AACGGAAGCG GCAAGTCGAC CTTGCTGAAA GTGCTCCTCG GCCTGTACCG GCCCGGGAGC
GGTTCCGTGC TGCTCGAGGG GAGGCCGATC TCGCGGATCG CCCCGAAGGA ACTGGCGAAG
CGCATCGCCT ATGTTCCCCA GACGCACCGA ATGGCCTTCG CCTACAGGGT CGTGGATGTC
GTCCTGATGG GAAGGACGCC TCACAAGCCC TTCTTCTCCA GGTATTCCCG GCATGACCTG
GACGTTGCGC TCCAGGCTCT GGACCGGCTG TCCATTGGGC ATCTGAAGGA CCAGAGTTAC
ACCGACATCA GCGGAGGGGA GCGCCAGTTG ACACTTATCG CGAGAGCCCT GGCCCAGGGC
GCCGACATCC TCGTGATGGA CGAGCCCGCG ACCAGCCTCG ACTTCGGGAA CCAGGTGAGA
CTGCTCGACC AGATAACCGG CCTCTCAAGA CTCGGCTTCA CTTTCGTCAA GTCCACCCAT
TTCCCGGATC ACGCCATGTG GATCGCCGAC CGGGTCGTGA TGCTGCAAAA GGGTTCCGTT
ATCGCAGACG GAAAACCGTG CGACGTGATG AACGATGAAT CCGTTTGCCG GCTCTACAAC
ACCGAGGTCA GCATACTGAA GGTGAACGGG ACGCTGAGAA CCTGCATGCC GCGTTCGTTG
ATAACGCGGA ACCCGGGCGC GAACAACGGG AGGGCACGGA TATCCGCAAA GCCATGA
 
Protein sequence
MGPMELIRAD GITFSYSRSP VLHNVSLSVR KGEIVSLLGP NGSGKSTLLK VLLGLYRPGS 
GSVLLEGRPI SRIAPKELAK RIAYVPQTHR MAFAYRVVDV VLMGRTPHKP FFSRYSRHDL
DVALQALDRL SIGHLKDQSY TDISGGERQL TLIARALAQG ADILVMDEPA TSLDFGNQVR
LLDQITGLSR LGFTFVKSTH FPDHAMWIAD RVVMLQKGSV IADGKPCDVM NDESVCRLYN
TEVSILKVNG TLRTCMPRSL ITRNPGANNG RARISAKP