Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfum_3702 |
Symbol | |
ID | 4457989 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Syntrophobacter fumaroxidans MPOB |
Kingdom | Bacteria |
Replicon accession | NC_008554 |
Strand | + |
Start bp | 4517666 |
End bp | 4518712 |
Gene Length | 1047 bp |
Protein Length | 348 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 639704475 |
Product | periplasmic binding protein |
Protein accession | YP_847807 |
Protein GI | 116751120 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0614] ABC-type Fe3+-hydroxamate transport system, periplasmic component |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGATCGAAA AGTCCAGGAA GCAAATCGTC GGATCATTGT TCCTCCTGTT CCTGTCGGTC CTCATTTCGG TGCAGGCCGA AGGAAAGGAA ATCGTCGACA TGGCCGGGCG CAAGGTGATC GTGCCGGACC GCGTCACCAA GGTCTACGGA GCGTCTCCTC CGGCCACCTA CCTGCTCTAC GCCGTGGATC CGGCTCTCAT CGCCGGCCTG AACTATCCGT TCAATCCCAA GGAGCGGACG TATCTGCGCC CCGACGTGGT ATCCCTTCCC GTGATCGGGG GATGGTTCGG CCAGGGCCGG ACTCCCAACC AGGAAGCCCT GCTGAAGGTC AAACCCGACG TCATGGTCGC CTGGATGTGG AAGACAAAAG CCGCGAACGA GAAGATCGAA CAGGTTGCGA GGCTTCTCGG CCTGCCCCTG GTTTACGTGA GATTGGACCA CCTGGGCGAG TATTCGGACG CCTTTCTTTT CATGGGGCGT CTCGTGGGCC GGGAGGAACG GAGCCGGCAG TTGAGCGAGT ATGCGAAACG CACCATGGCG GAGGTCGAGC CGGTCGTGGC GGCTGTTCCC CTGGGCAAGA GGGTTTCCGT CTACTACGCC GAAGCGCCGG ACGGGCTGAG CACCGAGTGC GACGCATCCC CGCACACGGA GCTCATCAAC CTCGCCGGGG GCGAAAACAT TTACCGGTGC GCGCCCAAGG ACGACTACGG CATGGAGAGA ATCTCCATCG AACAGGTCAT GCTTGCCGAT CCCGAGGTGA TCCTGGCCCA GGAGAAGGAG TACGTCGATC GTGTCCGATC CGATCCCGGC TGGAAGTCCA TCCGCGCCGT GAAGAACGGG AGGGTCCATC TGATTCCCGG GGCGCCTTTC AACTGGTTCG ACCGGCCCCC TTCGTTCATG CGTCTTCTCG GGATCAAGTG GCTGACGAAC CTTCTGTATC CCGACCGTTA TCCTTTGGAC CTCGCAAAGG AAACCAGGGA ATTCTACCGC CTCTTTCTGA ACGTCGAACT GGATGATGAC GCCCTGCGCG AGGTTCTGCA TCAATGA
|
Protein sequence | MIEKSRKQIV GSLFLLFLSV LISVQAEGKE IVDMAGRKVI VPDRVTKVYG ASPPATYLLY AVDPALIAGL NYPFNPKERT YLRPDVVSLP VIGGWFGQGR TPNQEALLKV KPDVMVAWMW KTKAANEKIE QVARLLGLPL VYVRLDHLGE YSDAFLFMGR LVGREERSRQ LSEYAKRTMA EVEPVVAAVP LGKRVSVYYA EAPDGLSTEC DASPHTELIN LAGGENIYRC APKDDYGMER ISIEQVMLAD PEVILAQEKE YVDRVRSDPG WKSIRAVKNG RVHLIPGAPF NWFDRPPSFM RLLGIKWLTN LLYPDRYPLD LAKETREFYR LFLNVELDDD ALREVLHQ
|
| |