Gene Sfum_3702 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_3702 
Symbol 
ID4457989 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp4517666 
End bp4518712 
Gene Length1047 bp 
Protein Length348 aa 
Translation table11 
GC content60% 
IMG OID639704475 
Productperiplasmic binding protein 
Protein accessionYP_847807 
Protein GI116751120 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0614] ABC-type Fe3+-hydroxamate transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCGAAA AGTCCAGGAA GCAAATCGTC GGATCATTGT TCCTCCTGTT CCTGTCGGTC 
CTCATTTCGG TGCAGGCCGA AGGAAAGGAA ATCGTCGACA TGGCCGGGCG CAAGGTGATC
GTGCCGGACC GCGTCACCAA GGTCTACGGA GCGTCTCCTC CGGCCACCTA CCTGCTCTAC
GCCGTGGATC CGGCTCTCAT CGCCGGCCTG AACTATCCGT TCAATCCCAA GGAGCGGACG
TATCTGCGCC CCGACGTGGT ATCCCTTCCC GTGATCGGGG GATGGTTCGG CCAGGGCCGG
ACTCCCAACC AGGAAGCCCT GCTGAAGGTC AAACCCGACG TCATGGTCGC CTGGATGTGG
AAGACAAAAG CCGCGAACGA GAAGATCGAA CAGGTTGCGA GGCTTCTCGG CCTGCCCCTG
GTTTACGTGA GATTGGACCA CCTGGGCGAG TATTCGGACG CCTTTCTTTT CATGGGGCGT
CTCGTGGGCC GGGAGGAACG GAGCCGGCAG TTGAGCGAGT ATGCGAAACG CACCATGGCG
GAGGTCGAGC CGGTCGTGGC GGCTGTTCCC CTGGGCAAGA GGGTTTCCGT CTACTACGCC
GAAGCGCCGG ACGGGCTGAG CACCGAGTGC GACGCATCCC CGCACACGGA GCTCATCAAC
CTCGCCGGGG GCGAAAACAT TTACCGGTGC GCGCCCAAGG ACGACTACGG CATGGAGAGA
ATCTCCATCG AACAGGTCAT GCTTGCCGAT CCCGAGGTGA TCCTGGCCCA GGAGAAGGAG
TACGTCGATC GTGTCCGATC CGATCCCGGC TGGAAGTCCA TCCGCGCCGT GAAGAACGGG
AGGGTCCATC TGATTCCCGG GGCGCCTTTC AACTGGTTCG ACCGGCCCCC TTCGTTCATG
CGTCTTCTCG GGATCAAGTG GCTGACGAAC CTTCTGTATC CCGACCGTTA TCCTTTGGAC
CTCGCAAAGG AAACCAGGGA ATTCTACCGC CTCTTTCTGA ACGTCGAACT GGATGATGAC
GCCCTGCGCG AGGTTCTGCA TCAATGA
 
Protein sequence
MIEKSRKQIV GSLFLLFLSV LISVQAEGKE IVDMAGRKVI VPDRVTKVYG ASPPATYLLY 
AVDPALIAGL NYPFNPKERT YLRPDVVSLP VIGGWFGQGR TPNQEALLKV KPDVMVAWMW
KTKAANEKIE QVARLLGLPL VYVRLDHLGE YSDAFLFMGR LVGREERSRQ LSEYAKRTMA
EVEPVVAAVP LGKRVSVYYA EAPDGLSTEC DASPHTELIN LAGGENIYRC APKDDYGMER
ISIEQVMLAD PEVILAQEKE YVDRVRSDPG WKSIRAVKNG RVHLIPGAPF NWFDRPPSFM
RLLGIKWLTN LLYPDRYPLD LAKETREFYR LFLNVELDDD ALREVLHQ