| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_3678 |
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| Symbol | |
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| ID | 4458000 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Syntrophobacter fumaroxidans MPOB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008554 |
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| Strand | - |
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| Start bp | 4487863 |
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| End bp | 4489272 |
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| Gene Length | 1410 bp |
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| Protein Length | 469 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 639704451 |
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| Product | outer membrane efflux protein |
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| Protein accession | YP_847783 |
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| Protein GI | 116751096 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | [TIGR01845] efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0849669 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATGGAA GCCTGCTTGT TCTACTGAGT CTGATCGTCG CGTTCCTGAG CGGCTGCACT
ATGGCTCCGA AATACTCGAG GCCCGAAGCC CCGGTTCCCG CCACCTGGCC GAGCGGGCCC
GCCTACGAGG ACAGTCAGGC CGTTCCCGGC GCGCCCGAAG CGAGCGCGAT CGGATGGCGG
GATTTCTTTT CCGACGAGCG GCTTCATAAG ATCATCGAGA CGGCTCTGCA CAACAACCTC
AACCTGCGCC TCGCCGCCTT GAACGTCGAG ATGGCCCGCG CGATCTACGG CATCCGCCGC
GTCGAGCTGC TGCCGACCCT CGACGGCAGC GCCTCTTACG TCAAGTCACG GGTGCCGGCC
GATCTCTCGG GTAAAGATCA TGCCGTTACG GCCGACGCGT ACGACGTCAA TCTCGGCATC
GCCGCCTGGG AGATCGATTT CTTCGGTCGC CTTCGCAGCC TGAAAGACAA GGCCCTGGAG
GAATACCTCG CCACCGAGCA GGCTCGCCGC AGCGTGCAAA TCTCGCTCAT ATCCGATATC
GCCCGCATCT ACCTGCTGCT CGGCGCGGAC CGGGAACGCC TCGACCTGGC CCGCTCCACC
GTCGAGACTC AGCAGACCGT CTACGAACTG GTTCGAAGGC GGCACGAAGT GGGACTCGCG
CCCGAACTGG ATGTTCGTCA GGCCCAGACG CGCGTGGAAG CGGCCCGTGT GGATGAGGCC
CGCTACACGA GACTGGTTGC CGAAGGCGAG AATGCCCTGA ACCTGCTGGC GGGCTCCCCG
GTGGCGAGCG AGTTGCTGCC TGCGGACCTG AGCAGCATTG GCTCCAACTT GGAGATCTCC
CCCGGTATTT CCTCCGAGGT GCTCTTGCGC CGCCCCGACA TCCTCCAGGC GGAAAGCATG
CTCAAGGCCG CCAATGCCAA CATCGGCGCC GCCCGTGCGG CATTCTTCCC CCGCATCTCC
CTGACGACCG CCTTCGGGAC TGCCAGCGGC GAACTGGCCG GACTGTTCAA AGCCGGTTCG
AGTGCCTGGA CTTTTGCCCC TCAGATCGTG ATGCCGATCT TTGACGCCCG CACGTGGTGG
GCGCTGAAAG CAACGAAGGT GGACCGGGAA ATCGCCGTCA CTGAATATCA GAAAACGATC
CAGACGGCCT TCAGGGAAGT GGCCGACGCC CTCGCCCTGT TCGGCACCGT GGATGACCAG
TTGACGGCGC AGCAGTCCCT GGTGGACGCC AGCGCCGCAA CATACCGTCT TTCCAACGCC
CGCTACATGA AGGGGATAGA CAATTTCCTG GGCGTCCTCG ATTCGCAGCG CTCTCTCTAC
GAGGCGCAGC AGGCGCTGAT CGGCACCCGC CTGGTGCGGC TCACCAACCA GGTGAGGCTT
TATGCCGTGC TGGGCGGGGG AAGCGACTAG
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| Protein sequence | MNGSLLVLLS LIVAFLSGCT MAPKYSRPEA PVPATWPSGP AYEDSQAVPG APEASAIGWR
DFFSDERLHK IIETALHNNL NLRLAALNVE MARAIYGIRR VELLPTLDGS ASYVKSRVPA
DLSGKDHAVT ADAYDVNLGI AAWEIDFFGR LRSLKDKALE EYLATEQARR SVQISLISDI
ARIYLLLGAD RERLDLARST VETQQTVYEL VRRRHEVGLA PELDVRQAQT RVEAARVDEA
RYTRLVAEGE NALNLLAGSP VASELLPADL SSIGSNLEIS PGISSEVLLR RPDILQAESM
LKAANANIGA ARAAFFPRIS LTTAFGTASG ELAGLFKAGS SAWTFAPQIV MPIFDARTWW
ALKATKVDRE IAVTEYQKTI QTAFREVADA LALFGTVDDQ LTAQQSLVDA SAATYRLSNA
RYMKGIDNFL GVLDSQRSLY EAQQALIGTR LVRLTNQVRL YAVLGGGSD
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