Gene Sfum_3677 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_3677 
Symbol 
ID4457999 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp4485518 
End bp4487437 
Gene Length1920 bp 
Protein Length639 aa 
Translation table11 
GC content62% 
IMG OID639704450 
ProductFG-GAP repeat-containing protein 
Protein accessionYP_847782 
Protein GI116751095 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.431632 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGAAAAC CTGGACTGTC TTTCGTTATT TGCGCCCTTG TCCCGGTGCT GACCTGGTTC 
TGCGCGACCG CGCCGGCTGC CGTCGCCGCC GTCGGAAACC CAGTCCTCAA GTGGAAACAC
GGCGGCTGCT ATTCCTCGTG GTGCGAAACG GGCTGGTATT CCTCCCCCGC GGTCGCTGAC
CTCGACGGCG ACGGGAAAAT GGAGGTGCTG GGCGCAGCTT ACAGTCTTTT CGTCCTCAAC
GGCGAGGACG GCTCACAGAA GTTCAGCGTG ACCGCCGGTT CCGGAGGCCG CGTATGGCCG
GGCGTGGTGG TCGCGGACAT CGACCGGGAC GGCAAGCCCG AGATCGTCCT CGCCCAGGGC
GGCGGCTACG TCACGGTGCT CGACCACGCG GGCAAGACCG TCTGGTCGCG GCAGCCCACG
ACCAGCGAAC TGCGCGGCTT GAGCGCCTAC GACCTGGACC GCGACGGATT TCTCGAAATC
GTCGTGACCG GAGCAGTCGG CAGCAAGACC AACACGTGGG TGTACAACCA CAATGGCCGC
CTCCTCGACG GATGGCCTCA ACTCGCGAAC GACAACGGTT ATGCCTGGGG CGTTTATAAC
AGCAATGCCG CGGTCTACGA TTTGGACAAG GACGGGCAGG GCGAGATCGT CGTCCCGTCC
GATGTGCACT ACATTTGCGC CTACAATGCA AATGGTTCCC ACATTCCTGC CAACAACACC
ATGTACGAGG GCAAGAGATG GGGACAGGTG GGGGTCTGGG AAAGCCTGGG CGTTGAAAAG
CGCGGCTGGG GAACGTGCGA GCAGGGAGAC CCGCGTTCCG AGCGCCACCG CCCCAATTTC
GCCCACGGCG CCGCGACCAT TGCGGACGTC AACGGGGATT CGAACCTCGA AGTCGTGGTG
GCCGGCAACG TCTACGATTG CGCGACGGAA AATTACGACA GCAGGTACAA CGGGATCTAT
ATTTTCAACC GCGACCGCAC CCGGTTCAAC CGGGACGGTT TCGACTGGCG CAAGGTCCCA
TTGGATACGG GTGCGCCCTT GAGCGAGGAT TATGAGGTGA TTGAGAATTG TCAGCCGAAC
CCGGTCGTGG TCGACCTGGA CGGCGACGGC AGGAAGGAGA TCGTCTATTC CTCATACGAC
GGTCGGGTGC ACGCATTCTG GCTCGACAAG AAAGAGCACG GAAACTGGCC TTTCTCCGTT
TACGATTCAG GCGAGGGCAT CATGCGCTTC GCTTCCGAGC CGGTTGTGGC CGACCTGGAC
AACGACGGTT GCGCGGAAGT CATCTTCACT TCATGGGTGG AAAAGAGCGC TCACCGGACC
GGCAAACTCC ACATTCTCGA TTGCATGGGC AACCCCGTGC GTCAGGTCAG CCTGCCCGCC
GCCTACGGAA GCCCGGACTG GAACGGGGCA CTGGCGGCAC CAACCCTGGC GAACATCGAC
GATGACCAGG CCCTGGAAGT GGTGATCAAT ACCGCTCATT CCGGGCTGGT CGCCTACGAT
CTCCCCGGGA CGGCCAATGC CCGGATTCTC TGGGGCACGG GGCGAGGAAA TTATCAACGC
ACCGGCACGG CCGATCCATC CCCTCTGCCC ATCGTAACCG TCACCGCCAC CAAGACCCAG
GTGCCGGAAT CCGGGGCAAG CGGCACGGCA TTCCGCATCA GGAGGACGGG CGGCTCAGCT
TCCGCGATCA CCGTGAAATA CACCCTGAGC GGCACCGCTC GAAACGGCAT CGATTACGCG
AAACTGTCGG GAACCCGGAC ACTTCCCGCC GGCGTCTCTT CGGCGCTGGT CAAGCTCACA
CCCGTCGACG ACTCAAGAGA CGAAAAAAAC GAACGAGTCA TCATGAGGAT CTCGCCCGAT
TCATCCTACA TCGTCCGCAC CCCCGCAACC GCCGAGATCA TCATCGTGGA CAACGATTGA
 
Protein sequence
MRKPGLSFVI CALVPVLTWF CATAPAAVAA VGNPVLKWKH GGCYSSWCET GWYSSPAVAD 
LDGDGKMEVL GAAYSLFVLN GEDGSQKFSV TAGSGGRVWP GVVVADIDRD GKPEIVLAQG
GGYVTVLDHA GKTVWSRQPT TSELRGLSAY DLDRDGFLEI VVTGAVGSKT NTWVYNHNGR
LLDGWPQLAN DNGYAWGVYN SNAAVYDLDK DGQGEIVVPS DVHYICAYNA NGSHIPANNT
MYEGKRWGQV GVWESLGVEK RGWGTCEQGD PRSERHRPNF AHGAATIADV NGDSNLEVVV
AGNVYDCATE NYDSRYNGIY IFNRDRTRFN RDGFDWRKVP LDTGAPLSED YEVIENCQPN
PVVVDLDGDG RKEIVYSSYD GRVHAFWLDK KEHGNWPFSV YDSGEGIMRF ASEPVVADLD
NDGCAEVIFT SWVEKSAHRT GKLHILDCMG NPVRQVSLPA AYGSPDWNGA LAAPTLANID
DDQALEVVIN TAHSGLVAYD LPGTANARIL WGTGRGNYQR TGTADPSPLP IVTVTATKTQ
VPESGASGTA FRIRRTGGSA SAITVKYTLS GTARNGIDYA KLSGTRTLPA GVSSALVKLT
PVDDSRDEKN ERVIMRISPD SSYIVRTPAT AEIIIVDND