Gene Sfum_3624 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_3624 
Symbol 
ID4458080 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp4435627 
End bp4436661 
Gene Length1035 bp 
Protein Length344 aa 
Translation table11 
GC content56% 
IMG OID639704395 
ProductATPase domain-containing protein 
Protein accessionYP_847729 
Protein GI116751042 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0197283 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.342036 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATGACT TGCGGGAATC GCGCAAGGGC CGGAACGTGT GTCGCATCGT TCTGGTCTTC 
TCAATAATCG CCGTGTTGTC CGTGCTGCAC TACGGCACTG CGACCCGCCA CATGGAATAT
CATATTCTTT ATCGAGAACT GTATTTTGTT CCCATCGTAA TGGTAAGCCT CTGGTACGGC
CTGAGGGCAG GCGTGTACTT TTCCCTCCTG GTCGTCATTC TTTACACGCC TCACGTGATG
ATGACCTGGA GTGGCCAGCC CGGCGTCAAT GTAGGGAACC TGTCGCAGAT CATCGTATTC
ATCCTGGTGT CTGCAATCAC CGGCACCCTT TCCGACCGGG AGAGGAAACG CCAGCTGGAA
ATCAGGGAAG CCCAGAATCT GGCATCGTTG GGAAAGGCAT CACTGGCGAT GACTTCCGAG
CTGCGAGAAG TTCTCGACGC ACTGAAAGAA CTGATGAAGG ACCGCGAAAT GCCGGCGAGC
CCCAATTTCA GCCAGAGGCT GAAGAATCAG GTGGACAGAA TCACGACGTT GGATCACACC
TTGTCGCATT TCACTCTGGA GCGCTCCGAA GCCCAGAAAG ATTTTGCCGA AGTCGACAGC
TCCGTTGAAC GTGTGAAAAG CAAACTGAAG CCCTTGGCCG AGCGTTCGGG AGTGACCGTT
GAAACGCGGC TGGAGCCGGC TTTGGGCCTG CTCGCAGTCA ACGAGCTCGA TTTCGTGTGG
ATGATCGAGG AACTCACCAC GAACGCAATC GAAAGCTCGA CGGCCGGCAG CACGGTGACC
ATCGCTTCCA GGTGGTCCGA GGGACAGTGT GAGGTCGAGG TCCATGACCG GGGAATCGGT
ATTCCTCCCG AGAATCTGTC GAAGATTTTT GTTCCGTTCT TCACCACAAA GGAGAGGGGG
ACCGGTCTGA GCATGGCGGT CTGCAAAAAG ATCATGAAGG ATTGCGACGG GGAAATACGC
GTGGACAGCG ACCGGGCCGA AGGGACCAGA CTTGTTCTGG TCTTCCGGCG GATACATCCC
CAAACCCGCG GTTGA
 
Protein sequence
MNDLRESRKG RNVCRIVLVF SIIAVLSVLH YGTATRHMEY HILYRELYFV PIVMVSLWYG 
LRAGVYFSLL VVILYTPHVM MTWSGQPGVN VGNLSQIIVF ILVSAITGTL SDRERKRQLE
IREAQNLASL GKASLAMTSE LREVLDALKE LMKDREMPAS PNFSQRLKNQ VDRITTLDHT
LSHFTLERSE AQKDFAEVDS SVERVKSKLK PLAERSGVTV ETRLEPALGL LAVNELDFVW
MIEELTTNAI ESSTAGSTVT IASRWSEGQC EVEVHDRGIG IPPENLSKIF VPFFTTKERG
TGLSMAVCKK IMKDCDGEIR VDSDRAEGTR LVLVFRRIHP QTRG