| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_3586 |
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| Symbol | |
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| ID | 4458112 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Syntrophobacter fumaroxidans MPOB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008554 |
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| Strand | - |
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| Start bp | 4395800 |
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| End bp | 4397089 |
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| Gene Length | 1290 bp |
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| Protein Length | 429 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 639704357 |
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| Product | TRAP dicarboxylate transporter, DctM subunit |
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| Protein accession | YP_847691 |
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| Protein GI | 116751004 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1593] TRAP-type C4-dicarboxylate transport system, large permease component |
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| TIGRFAM ID | [TIGR00786] TRAP transporter, DctM subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.518981 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCGCCC TGATCATCGC GTTTTTCGTG ACGCTCATGC TTGGAGTCCC GGTGGCCTTC
TGCCTCGGGC TCGCGGCCTT GGCTTTTCTT CTGTTCTGCG GCCAGGAATC CCTGTTGATC
GTTCCCACGC TCATGTTTTC CGGCGTCGAT TCCTTCCCGC TGATGGCCAT TCCGTTTTTC
ATCATGGCCG GAGACCTGGC CGAGCGCAGC GGCATTCTGC CGAGCCTGGT CGGCCTGGCG
AAGGCCCTGG TGGGGCATTG GCGGGCGGGC CTGGCCCATG TGAGCATCGT CACGGAGATG
TTCCTGTCGG GGGTGACCGG CACGGCCGTT GGGGATGCGG CGGCCATCGG GTCTATTTTC
ATTCCGAGCA TGAAACGAGA GGGTTATGAC GCGCGGTTCG CCGCGACGCT GGCTGCCGTC
GCATCCATCA TGGGTCCCCT GATTCCCCCC AGCGTCGGGA TGCTGATCTA TTCCTTCGTT
CAAGGAGGCA CCGTCTCCGT CGCCGCCCTC TTCGTGGCGG GTGCCGTGCC GGGCGTGCTC
GTCGGAGCGG GCCTCATGAT CATTTGCACC ATTCTGGCAA GGCGCCGCAA CTACCCCGTC
AGCAGCGAGC GGTTCAGCAT TCGCAAGGTC TTTGAATGCT TCAGGGGAGC CCTGCTGGGC
ATCACCGCCA TGGCGATCAT CCTGGGAGGC ATCCTCACCG GAATCTTCAC GCCCACGGAA
GCCGGAGCCG CCGCGACGGC CTATGTCCTG ATCGTGGGGG CGTTTTTCAC CCGGAAGCTG
AAATTTTCCA GTATCATCGC GTCACTGCAC ATGACCGCCG TGGTCAGCTC CACCGTTTTG
ATCCTGATGG CCACCGCGAA GGTCTGCGCC TGGATCCTGA CCAGCTCCCA GGTGCCTCAG
AAGATCGGGG GCATGTTGAT GGCCTTTTCG ACGAGCCCGA TCTTCTTCAT CACGCTGGTA
GTCCTCCTCC TGACGGTTTT CGGATTTTTC ATCGAGGGCA TCGCCATCAT GATCATGTTT
GTCCCGGTGC TGGCGCCGGC CGCCGATTAC TACGGAATCG AGGCCCATCA CTTCGCCCTG
GTTTTCGTCA TGGCGATCCA GATTGCGGTG ATCACGCCAC CCGTGTGCCT GAGCCTCTTC
GTCACCTCGA AGATCGCGGG AATCAAGCTC GAGGATACCT TCCGGGAGGT CATGCCGTAC
TGGGTGTTCC TGGTTGCCCT GACCCTCATG GTGGCCTACT GGCCGGGCAT GACGATGTGG
CTGCCGAGGA TGCTCGGGCT TCTGCATTAG
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| Protein sequence | MIALIIAFFV TLMLGVPVAF CLGLAALAFL LFCGQESLLI VPTLMFSGVD SFPLMAIPFF
IMAGDLAERS GILPSLVGLA KALVGHWRAG LAHVSIVTEM FLSGVTGTAV GDAAAIGSIF
IPSMKREGYD ARFAATLAAV ASIMGPLIPP SVGMLIYSFV QGGTVSVAAL FVAGAVPGVL
VGAGLMIICT ILARRRNYPV SSERFSIRKV FECFRGALLG ITAMAIILGG ILTGIFTPTE
AGAAATAYVL IVGAFFTRKL KFSSIIASLH MTAVVSSTVL ILMATAKVCA WILTSSQVPQ
KIGGMLMAFS TSPIFFITLV VLLLTVFGFF IEGIAIMIMF VPVLAPAADY YGIEAHHFAL
VFVMAIQIAV ITPPVCLSLF VTSKIAGIKL EDTFREVMPY WVFLVALTLM VAYWPGMTMW
LPRMLGLLH
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