| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_3578 |
|---|
| Symbol | |
|---|
| ID | 4458104 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Syntrophobacter fumaroxidans MPOB |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008554 |
|---|
| Strand | + |
|---|
| Start bp | 4386226 |
|---|
| End bp | 4388154 |
|---|
| Gene Length | 1929 bp |
|---|
| Protein Length | 642 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 639704349 |
|---|
| Product | NADH:flavin oxidoreductase/NADH oxidase |
|---|
| Protein accession | YP_847683 |
|---|
| Protein GI | 116750996 |
|---|
| COG category | [C] Energy production and conversion
[O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0492] Thioredoxin reductase
[COG1902] NADH:flavin oxidoreductases, Old Yellow Enzyme family |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 4 |
|---|
| Plasmid unclonability p-value | 0.0429702 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.295413 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCGCTTT CCGAATGCCT GTCTTTCAAC GAATGCGGAT TCCTGTGGTC GCCCGGACCG
GGAAGGAAAG GCGTGGATAT GTTGATCTCC TCCCCTTTGG TCATAAAGGG ACGGGTATTT
CCCAACCGTT GCTCCATGTC GCCCATGGTT CCGAACTGCG CGGGCGAGGA CGGTTCGGTA
ACGGAAGCCT ACCGGAACTT CTACCTGGCC CGGGCGCGGG CCCGTGTCGG GTATATCGTT
TTGGGGGGAG TGTATGTGCA CGAGAATGGG AAAGGCTTCC CGAGGCAGCT GGGCATCCAT
TCGGACGCGG TCAAGACGGG GTTGAGCGAG CTGGCGCAAG CGCTCGGCAA GTACTCCCGG
GTCGGCGTCC AGCTCAGCTT CAAAAGCCTT CAGAGACTCC CCGAGGACTT CAAGGAATCC
GAAATCGCGG TCTGCCGCAA AGCGTTTGTC GAGGCGGCGG TTCGCGCGCG CGACTGCGGA
TTCGATGCGA TCGAGCTGCA CGCCTGCCAT GATTACTGGT TGAATTTCTT TCTCTCCCCC
CATTTCAATC ATCGCCGGGA TGCGTACGGT GGGAGCCTGG AGAATCGGTC CCGCCTCTTG
CGTGAGATCG TGCGGGATAT CCGGTCGGCG GTCGGCGACT CGATGATCCT TGGTGTCCGG
TTGAGCATGG AGGAGTTCGT CGAGGACGGA TTGACCCTGT CGGAAACGCT CCAGGTCGGC
ACCTGGCTCG AGAAGCTCGG TGTCGATTAC CTCAGCGCCT CGGGCGGGAT CGGCAAGACC
CAGCACCGCA TGAGCCCACC CATGGAGGTC CCGCGCGGGT CCTTGCTCTA CTTGGCCGAA
GCGCTCAAGA GGAGCGTTTC CGTCCCCGTC ATCGGCGTGG GTCGGCTGGA TCGCCCCGAG
GTCTTCAGGA AAGCGGTGGA AGAGGGCTGC GCGGACATTG CGGGTGTCGG AAGGTCTCTC
ATCGCCGATC CCGAATATGT CGCGAAAGTC CTTGACGGGA GGGACGAGGA CATCAGGCCC
TGCCTCGCCT GCAACTACTG CCTGCTGTGC CTGCATCGCG GCGAAGACGT GCGGTGTGCG
GTCAATCCGC TTGTGGGGCG CGATCTCTAC CGGCCGGTGC CGCTGCGCGG GAGACTCAAC
GTTTTGGTCG TCGGCGCGGG ACCTGCCGGG CTGGCCGCCG CGGCCGCCGC GGCCGAGCGG
GGCGCCGCCG TCAGGCTGGT GGAAAAGGAT GCCGTGCCGG GAGGCATGTT GAATGCCGGC
AAGGTCCCGC CTCACAAGGA ACCGATCCAG GAATTCATCG ACTACCTGGT GAAACGGGCT
GCTGCCTGCG GTGTGGAAAT CGTGACGGGG CATGCGGTGG AAGCTTCGGA CATCCGGGCG
CTTGCTCCCG ATCGGGTGAT CGTCGCCACG GGCAGCGCTT CGATCGCGCT CAGGGCCGAC
GGCCTGGAGG GTAACGAAAG GGTGGTCCTG GTCGAGAGCC TGTTGCGCTC GGGACGGATT
TCGACGGGGG GCCGGTACAT CGTCGTGGGC GGCGGCGCGG CCGGGCTGGA AACGGCGGAA
TTCATCGCGG AAAACGGTGG AAGCGTCACA GTGATCGAGA TGACGGAAAC ACTGGGCAGG
GGCCTCCATG CAACTCGGCT GAACCTGATG CTGGAGAACC TCGCGAGGCT GAACGTCGCC
GTGATGCCCA ACACCAGGCT CGTTTCCGTG GACGGCGGCG CGGTGCGGGC TGAAACCCCC
GGGGGCCCCG TTGTTCTGGG CCCTTTTGAT ACGATCGTCA TGGCGGTGGG GTACAGGAGT
GAAGCGACAC TCTCCCGGGG TCTCGACCCG CGGTTCGCTG CGACGGTCAT CGGGGATGCC
CTGCAGCCCC GATCGATCTA TGAGGCCGTG AAGGAAGGTT TTGATGCGGC GGTCGCCCTA
AAGGCCTGA
|
|---|
| Protein sequence | MPLSECLSFN ECGFLWSPGP GRKGVDMLIS SPLVIKGRVF PNRCSMSPMV PNCAGEDGSV
TEAYRNFYLA RARARVGYIV LGGVYVHENG KGFPRQLGIH SDAVKTGLSE LAQALGKYSR
VGVQLSFKSL QRLPEDFKES EIAVCRKAFV EAAVRARDCG FDAIELHACH DYWLNFFLSP
HFNHRRDAYG GSLENRSRLL REIVRDIRSA VGDSMILGVR LSMEEFVEDG LTLSETLQVG
TWLEKLGVDY LSASGGIGKT QHRMSPPMEV PRGSLLYLAE ALKRSVSVPV IGVGRLDRPE
VFRKAVEEGC ADIAGVGRSL IADPEYVAKV LDGRDEDIRP CLACNYCLLC LHRGEDVRCA
VNPLVGRDLY RPVPLRGRLN VLVVGAGPAG LAAAAAAAER GAAVRLVEKD AVPGGMLNAG
KVPPHKEPIQ EFIDYLVKRA AACGVEIVTG HAVEASDIRA LAPDRVIVAT GSASIALRAD
GLEGNERVVL VESLLRSGRI STGGRYIVVG GGAAGLETAE FIAENGGSVT VIEMTETLGR
GLHATRLNLM LENLARLNVA VMPNTRLVSV DGGAVRAETP GGPVVLGPFD TIVMAVGYRS
EATLSRGLDP RFAATVIGDA LQPRSIYEAV KEGFDAAVAL KA
|
|---|
| |