| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_3546 |
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| Symbol | |
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| ID | 4458142 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Syntrophobacter fumaroxidans MPOB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008554 |
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| Strand | + |
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| Start bp | 4339971 |
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| End bp | 4342745 |
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| Gene Length | 2775 bp |
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| Protein Length | 924 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 639704317 |
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| Product | glycosyl transferase family protein |
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| Protein accession | YP_847651 |
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| Protein GI | 116750964 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1215] Glycosyltransferases, probably involved in cell wall biogenesis |
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| TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCAGGC CGGCACACAA GATTTTCGAC CTAGCGGCGG ACGACCGCAT GGAAGACGGC
GACGGGATCG AGCCACTGGA GAACCGGGCG GAAGAAACCA CTGTCTTGCG CCCGAGAATC
GCCAGGGATG CGGTCCCGAT CGACGGACGC ACGGGAACCG AGGATGGCGC TGAGAAGAAA
GAGCCTTTAT CCTTCAAAAT TCAATCCGAT GAATCCGGAA TTCTGAGACC TGTCTTTCCA
AAGGCGGGGA ATTCCACGGG TGTTGCCCGG TTCTTCCTGA GCCCCCCCAA AACCATTCCC
GTGGTTGACG GTGTAAGGCC CCAGGTGAAG GGCAAGTTCC TTTTCGTCGG CGACGACAAG
TTTTACGTTC GCGGTGTGAC CTACGGTCCT TTCCGCCCCG AAGAGGACGG TTGCGAGTAC
CATACTCCCG AGGTGGTCGA TAAGGATTTC GCTCAGATGG CCGCCAACAG CATCAATGCG
GTACGGACCT ACACGGTTCC GCCGCGCTGG CTGCTCGACA TCGCGCAAAA ACACGGGTTG
CGGGTGATGG TGGGGCTTCC CTGGGAAGAG CACATCGCTT TTCTGGACAG CAAGAAAATG
GCTCGGGACA TCGAGAGGCG GGTGCGCCTG GGGGTGAAGG AATGCGCCGG CCATCCCGCG
CTTTTGTGCC TCACCATCGG CAACGAAATT CCGGCCTCGA TCGTGCGCTG GTACGGCGCC
CGGAAGGTGG AAAACTTTCT GAAGCGGCTC TACGAGGCGG CCAAGGCGGA AGACCCCGAA
GCGCTGGTGA CCTACGTCAA CTTCCCCACC ACCGAATATC TGCAGCTGCC ATTCGTGGAT
TTCGTTTCCT TCAACGTTTA CCTGGAAACG AGGGAGAAAC TGGAAGGATA CCTGGCCCGC
CTGCAGAACC TTGCCGGGGA GAAACCGCTG GTCATGGCGG AAATCGGGCT GGACAGCATC
CGAAACGGAG TGGATGTCCA GGCTTCCACG CTTTCCTGGC AGATCCGGTC GACGTTCGCC
ACCGGCTGCG CGGGGATGTT CGTTTTCTCC TGGACGGATG AATGGCATCG GGGCGGGTTC
GACATCGACG ACTGGGGATT CGGCGTGACG GACCGGGACC GGAATCCCAA GCCGACCCTG
GACGCGATCA GGAAAGCGTT TGCGGAAATC CCGTTCGCGC CGGACCTGGA GTGGCCGAGC
ATATCGGTGG TGGTTTGCTC CTACAACGGG TCGCGAACCA TCCGCAACTG CCTCGACGGG
CTGCGCCGGC TGGACTACCC CAACTTTGAG GTGGTCGTGG TCAACGACGG CTCCACGGAC
GGAACCGGGG AAATTGCCGC GGAATATGGT TTCAAGGTGA TCAATACGAC CAACCACGGG
TTGAGCAGCG CCCGGAATAC GGGGATGCGA GCCGCCAAAG GCGAGATTGT CGCCTACATC
GACGACGACG CCCGCCCGGA CCCGCACTGG CTGACCTATC TTGCCTATAC GTTCCTCACC
ACCGACCACG TCGGTGTCGG CGGGCCCAAT CTGCCTCCCC CGGAAGACGG TCCCATCGCC
GCCTGCGTGG CGAATTCTCC GGGTGGTCCC ATCCATGTGC TGCTCACCGA CCAGGAGGCC
GAACACATTC CGGGTTGCAA CATGGCCTTT CGGAAATCGG CGCTCGAGGC CATCGACGGT
TTCGACCACC GGTTCCGGAT CGCAGGCGAC GACGTGGATC TTTGCTGGCG GCTCCAGAAG
AAAGGCTGGA CCCTCGGGTT CAACCCTGCC GCCATGGTCT GGCACCATCG ACGGAATTCG
GTGAAGGCTT ACTGGAAGCA GCAGAAGAAC TACGGGAAAG CGGAAGCTTT CCTGGAGAAG
AAATGGCCTG AAAAATACAA CGCGGCCGGG CATGTTCCCT GGGCCGGGCG CCTCTACTTC
AAGGGATTCG AGCAGTTGCT CAGCTGGTCG CGCGGCCGTA TCTACCAGGG CACCTGGGGC
AGCGCCCTGT TCCAGTCGAT CTATCAGCCC GCGCCCACGC TGCTCTGGTC CCTGCCGATG
ATGCCCGAGT GGTACGCCAT CATCGCGGCG CTCGCGGTTT TCTCCGTGCT GGGCATCGAA
TGGTCGCCGC TGCTCCTGGC CCTGCCGCTG CTCCTGTTCG CGGTTTTCGT GCCGGTTCTG
CACGCATGCA TGTGCGCCAT GCACGTGGAT TTTTCCCAGC ACGGCGGCTC GCGCCGGCAG
GTCTTCAAGC TGCGCGTCCT GACCGCAACG CTGCACCTGA TGCAGCCCCT GGCCCGGCTC
GTCGGCCGTG TGCGGCTCGG CCTCACCCCC TGGCGGAACT GCTCCGTTCC GGGGATCGCC
CAGCCCTGGC CGTGGCCCAG GATGTTCACC GTGTGGAGCG AACAGTGGAG GTCTCCGCTG
GACTGGCTGG AGTCGCTCGA ATCCGGCATC CGAGGACTTC GGACCGTGGT TCTCAGGGGC
GGCGATTTCG ACCGCTGGGA CCTCGAGCTG CGCGGCGGGC TGCTCGGCAG CGTCAGGGTG
CTCATGGCCG TTGAGGAGCA CGGGGGCGGC AGGCAATTCG TGCGCGTCCG CACCTGGCCC
CGGTGTTCGA CGGCGGGAAT CGCGGTGACC CTGCTCTTCG GGTTTCTTGC GGCCTGCGCG
GCCCTGAGTC ATGCCTGGAT GGCGTGCGGC CTCTTCTATG CCATCGCCTT CCTGTTCATG
ATCTGGATCG TCAAGGAGTG TTCCGCCGCC ATGTCGGTGA TGGTGCGCCT CTTGGGGACA
GAGAACGATT CATGA
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| Protein sequence | MARPAHKIFD LAADDRMEDG DGIEPLENRA EETTVLRPRI ARDAVPIDGR TGTEDGAEKK
EPLSFKIQSD ESGILRPVFP KAGNSTGVAR FFLSPPKTIP VVDGVRPQVK GKFLFVGDDK
FYVRGVTYGP FRPEEDGCEY HTPEVVDKDF AQMAANSINA VRTYTVPPRW LLDIAQKHGL
RVMVGLPWEE HIAFLDSKKM ARDIERRVRL GVKECAGHPA LLCLTIGNEI PASIVRWYGA
RKVENFLKRL YEAAKAEDPE ALVTYVNFPT TEYLQLPFVD FVSFNVYLET REKLEGYLAR
LQNLAGEKPL VMAEIGLDSI RNGVDVQAST LSWQIRSTFA TGCAGMFVFS WTDEWHRGGF
DIDDWGFGVT DRDRNPKPTL DAIRKAFAEI PFAPDLEWPS ISVVVCSYNG SRTIRNCLDG
LRRLDYPNFE VVVVNDGSTD GTGEIAAEYG FKVINTTNHG LSSARNTGMR AAKGEIVAYI
DDDARPDPHW LTYLAYTFLT TDHVGVGGPN LPPPEDGPIA ACVANSPGGP IHVLLTDQEA
EHIPGCNMAF RKSALEAIDG FDHRFRIAGD DVDLCWRLQK KGWTLGFNPA AMVWHHRRNS
VKAYWKQQKN YGKAEAFLEK KWPEKYNAAG HVPWAGRLYF KGFEQLLSWS RGRIYQGTWG
SALFQSIYQP APTLLWSLPM MPEWYAIIAA LAVFSVLGIE WSPLLLALPL LLFAVFVPVL
HACMCAMHVD FSQHGGSRRQ VFKLRVLTAT LHLMQPLARL VGRVRLGLTP WRNCSVPGIA
QPWPWPRMFT VWSEQWRSPL DWLESLESGI RGLRTVVLRG GDFDRWDLEL RGGLLGSVRV
LMAVEEHGGG RQFVRVRTWP RCSTAGIAVT LLFGFLAACA ALSHAWMACG LFYAIAFLFM
IWIVKECSAA MSVMVRLLGT ENDS
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