Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfum_3543 |
Symbol | |
ID | 4458139 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Syntrophobacter fumaroxidans MPOB |
Kingdom | Bacteria |
Replicon accession | NC_008554 |
Strand | + |
Start bp | 4336177 |
End bp | 4336983 |
Gene Length | 807 bp |
Protein Length | 268 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 639704314 |
Product | alpha/beta hydrolase fold |
Protein accession | YP_847648 |
Protein GI | 116750961 |
COG category | [R] General function prediction only |
COG ID | [COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.447096 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGGGATCGC TGGAGCCGGA CCTGCGTTTC AACGGTGTCG CGCTGGAGAC CGGCGTCCGC ATGCATTACG TGGAACGGGG ACCCGCCGGG GCGGAGGCGA CGGTCTTCAT TCACGGGTAC GCGGATTCCT GGTTTTCCTT CAGTCGCGTG CTTTCGGCGC TCTCGCCCCG GCACCGCGCG GTTGCCGTTG ACCTGAGGGG GCACGGGGAT TCGGAAAAGC CCATGGGCGC CTATTCCCTC GATGCTTTCG CGCGGGACGT CGTGTCCTTC ATGGATGCCG TCGGCGTGGA ACGGGCGAAC CTAGCCGGGC ATTCCATGGG GAGCTTCATC GCGCAGCGCG TCGCAATGAT CGCGCCGCAG CGGGTGAAGA GCCTCACCCT CATCAGTTCC GCGCCTACCT CAAAAGATCA TCCGCTTCTC CTGGAGCTGA AGGGAGCCGT CGACCGGTTG AGCGATCCCG TGGACCGCGC CTTCGTGGCC GAATTCCAGG CGACGACCAA TCCCGTTCCG GCGGACTTCA TGGAAGGCAT CATCTCCGAG AGTTTGAAAA TACCGGCGCG TATCTGGCGC GAAACGCTTC ACACCCTGCT CCTCGAGGAC CACAGCGCGC GGCTGCCCGA GATCGTCGTT CCCACGCTGA TCGCCTGGGG AAAGCAGGAC GGGTTTTTCA CCCGTGAGTT CCAGGACGGG CTGAGAGAAT TGATCCCCGC TTCGAACATC AAAACCTACG CCGCCGGTCA CGCCCTTCAC TGGGAAAAAC CCGCGGAATT CACGCGGGAC CTCGAAGCTT TCATTGCAGA GGCATGA
|
Protein sequence | MGSLEPDLRF NGVALETGVR MHYVERGPAG AEATVFIHGY ADSWFSFSRV LSALSPRHRA VAVDLRGHGD SEKPMGAYSL DAFARDVVSF MDAVGVERAN LAGHSMGSFI AQRVAMIAPQ RVKSLTLISS APTSKDHPLL LELKGAVDRL SDPVDRAFVA EFQATTNPVP ADFMEGIISE SLKIPARIWR ETLHTLLLED HSARLPEIVV PTLIAWGKQD GFFTREFQDG LRELIPASNI KTYAAGHALH WEKPAEFTRD LEAFIAEA
|
| |