Gene Sfum_3543 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_3543 
Symbol 
ID4458139 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp4336177 
End bp4336983 
Gene Length807 bp 
Protein Length268 aa 
Translation table11 
GC content63% 
IMG OID639704314 
Productalpha/beta hydrolase fold 
Protein accessionYP_847648 
Protein GI116750961 
COG category[R] General function prediction only 
COG ID[COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)  
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.447096 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGGATCGC TGGAGCCGGA CCTGCGTTTC AACGGTGTCG CGCTGGAGAC CGGCGTCCGC 
ATGCATTACG TGGAACGGGG ACCCGCCGGG GCGGAGGCGA CGGTCTTCAT TCACGGGTAC
GCGGATTCCT GGTTTTCCTT CAGTCGCGTG CTTTCGGCGC TCTCGCCCCG GCACCGCGCG
GTTGCCGTTG ACCTGAGGGG GCACGGGGAT TCGGAAAAGC CCATGGGCGC CTATTCCCTC
GATGCTTTCG CGCGGGACGT CGTGTCCTTC ATGGATGCCG TCGGCGTGGA ACGGGCGAAC
CTAGCCGGGC ATTCCATGGG GAGCTTCATC GCGCAGCGCG TCGCAATGAT CGCGCCGCAG
CGGGTGAAGA GCCTCACCCT CATCAGTTCC GCGCCTACCT CAAAAGATCA TCCGCTTCTC
CTGGAGCTGA AGGGAGCCGT CGACCGGTTG AGCGATCCCG TGGACCGCGC CTTCGTGGCC
GAATTCCAGG CGACGACCAA TCCCGTTCCG GCGGACTTCA TGGAAGGCAT CATCTCCGAG
AGTTTGAAAA TACCGGCGCG TATCTGGCGC GAAACGCTTC ACACCCTGCT CCTCGAGGAC
CACAGCGCGC GGCTGCCCGA GATCGTCGTT CCCACGCTGA TCGCCTGGGG AAAGCAGGAC
GGGTTTTTCA CCCGTGAGTT CCAGGACGGG CTGAGAGAAT TGATCCCCGC TTCGAACATC
AAAACCTACG CCGCCGGTCA CGCCCTTCAC TGGGAAAAAC CCGCGGAATT CACGCGGGAC
CTCGAAGCTT TCATTGCAGA GGCATGA
 
Protein sequence
MGSLEPDLRF NGVALETGVR MHYVERGPAG AEATVFIHGY ADSWFSFSRV LSALSPRHRA 
VAVDLRGHGD SEKPMGAYSL DAFARDVVSF MDAVGVERAN LAGHSMGSFI AQRVAMIAPQ
RVKSLTLISS APTSKDHPLL LELKGAVDRL SDPVDRAFVA EFQATTNPVP ADFMEGIISE
SLKIPARIWR ETLHTLLLED HSARLPEIVV PTLIAWGKQD GFFTREFQDG LRELIPASNI
KTYAAGHALH WEKPAEFTRD LEAFIAEA