Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfum_3500 |
Symbol | |
ID | 4458202 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Syntrophobacter fumaroxidans MPOB |
Kingdom | Bacteria |
Replicon accession | NC_008554 |
Strand | + |
Start bp | 4278691 |
End bp | 4279494 |
Gene Length | 804 bp |
Protein Length | 267 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 639704272 |
Product | HAD family hydrolase |
Protein accession | YP_847606 |
Protein GI | 116750919 |
COG category | [R] General function prediction only |
COG ID | [COG0561] Predicted hydrolases of the HAD superfamily |
TIGRFAM ID | [TIGR01484] HAD-superfamily hydrolase, subfamily IIB |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.126173 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATTGCAT CGATCCGTGC CATCGACGTC GAGACTGCGA GGAACCTCAA GGGGATATTC TTCGACATCG ACGACACTTT CACCACAAAC GGGAAGATCC CGGCGGTCGC CTACCAGGGG CTGTGGACTT TGAAGGAATC CGGCCTGAAA GTCGTTCCCA TCACCGGAAG GCCGGCGGGC TGGTGCGATC ATATCGCCCG CATGTGGCCC GTGGACGCCG TCGTGGGGGA AAACGGGGCT TTCTATTTCC GGTTCGACGA GCGGGCGGGA AAGCTCACAA AACGCTTCCT GGACCCGGCC CCGGTCCGCT GCGAAAAGCG AGTCCTGCTG CAGGCCGTCG AAAAGGATGT CCTCAGCTCG GTGCCCGGCA CGGCTCTCGC CTCCGATCAG CCATACCGGG AGACCGATCT TGCCATCGAT TTCCGTGAAG ACGTGGAGCC TCTGGGCTGG CCGGCGGTCG AGCGCATCTG CGCCGTCTTC CGAAAGCACG GCGCGACCTG CAAGGTCTCC TCGATCCACG TGAACGGCTG GTTCGGAGAT TACAACAAGC TCCACATGAC GCGAATCATG GCCAACGAGC TCTGGGGCGT CGACCTTGAG GCGGACCGGC GCTTTTACCT GTTTTGCGGA GATTCTCCCA ACGATGAACC GATGTTCGAA TTCTTCCCGC ACAGCGCGGG GGTTCGCAAC GTGCTTCAAT TCGCCGACCG GATGAGCCGG CTGCCGGCGT TCGTGGCGGA TCGCGAAGGC GGCGCGGGAT TCGCGGAAAT CGCCGAAACC GTTCTCTCTC TCAGGGCGAC CTGA
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Protein sequence | MIASIRAIDV ETARNLKGIF FDIDDTFTTN GKIPAVAYQG LWTLKESGLK VVPITGRPAG WCDHIARMWP VDAVVGENGA FYFRFDERAG KLTKRFLDPA PVRCEKRVLL QAVEKDVLSS VPGTALASDQ PYRETDLAID FREDVEPLGW PAVERICAVF RKHGATCKVS SIHVNGWFGD YNKLHMTRIM ANELWGVDLE ADRRFYLFCG DSPNDEPMFE FFPHSAGVRN VLQFADRMSR LPAFVADREG GAGFAEIAET VLSLRAT
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