Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfum_3437 |
Symbol | |
ID | 4458240 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Syntrophobacter fumaroxidans MPOB |
Kingdom | Bacteria |
Replicon accession | NC_008554 |
Strand | - |
Start bp | 4197862 |
End bp | 4199223 |
Gene Length | 1362 bp |
Protein Length | 453 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 639704207 |
Product | peptidase M28 |
Protein accession | YP_847543 |
Protein GI | 116750856 |
COG category | [R] General function prediction only |
COG ID | [COG2234] Predicted aminopeptidases |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 1 |
Fosmid unclonability p-value | 0.000160047 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGCAGTCAA TGACCTCGGG GGACCCGAAC CGCGGGGCGG CGTCCGAAAC CCGGCCTCAC CGGACGGCTC GACGATCGCC GACGCTCACC GTCCCGGTTT CGTGGTATAC TCCATTGGCC GACGACGGGA GGGGGCAGGC CCGAGCGATC CCCGGCCGCC CGGGAACCCA TTTTGCCGGG GGCCATGCGC GACCCCGTTC GAGACGGACG CACCGAGCGT CCTTGCAGAG GATCGACCGG TTTCCCGCTT CTCCGGTCGC AGATTTTAAC CTGCGCCGCT GTAGAAGGTG CTTCGATCCG CCGATCCATT ATTCGTACGG GCAGTTGAGT CAACACGGAT CAATCCTTTG GAAAGAAGGT GCAAAGAAGA GGCTTATGAA ATTCATACTC AAGTTTGTCC TGCTGGTTGT GGTCGTTGCG CTCATTCCGG CATCGGTGTG GTTTGTGGTC ACCCAGCCGA TAGTGACCAT GCCGTCGTCG GCGCCGACCA AAGCGGCTCC CGCCGCCGTC GATACGGCGC GATTGGAAGG GCATGTGCGA ACTCTCTCAC AGACCCTTCA CCCGCGAAAC GGGGGCAACC GGGAGAACAT GAATCGCGCG GCCGCATACA TTCGGCAGGA ATTCCAGAAT GCGGGAGGAC GGGTTGTCGA ACAGGCGTTC GACGATGAGG GTTCGGTGTA TCGGAACGTG AGCGCCCATT TCGGGCCGGA GACGGATGAG CGGATCGTCG TGGGGGCGCA TTACGACGCG TTCGGGGATT CCCCGGGAGC GGATGCCAAC GCCGGCGGGG TCGCGGGGTT GATCGAGCTG GCCGGTCTGC TCGGCAAAAC CGGGTTGAAG ACCCAGGTGG AACTGGTTGC TTACGCTCTC GCGCAGCCGC CCTACTGGGG AACGCCGAGA ATGGGCAGCG CCGTTCACGC TTTCTCGCTG AGAACGCAGA ACCGCGCGGT GCGGGTCATG ATCTGCCTGG ACATGATCGG TTGCTTCAGC GACAGGGAGG GGAGTCAGAA ATATCCCGTG CAGCAGTTGG AATGGCTCTA TTCGTCCAAA GGAAATTTCA TCGCCGTGGT GGGGAACCTG GGCCAGATAG ATGAGGTGCG CCGGGTCAAG ACGGCCATGA CGGGCGCTTC GCCCCTGCCC GTGTTTTCCG TCAATGCGCC CCTTTTCTTC TCGGGGATCG ACTTTTCGGA CCACCGCAAC TACTGGCAGG CCGATTACCG CGCGGTGGCG ATCACGGATA CGGCCGCTCT GCGAAACCCG AATTACCGTA CCGCCAGGGA TACGGCCGAT ACCCTCGACT ACAAACGGAT GGGCATGGTG GTGCAGGGCG TCCATGCAGC GGTGATCGCC TTCGACAGAT AA
|
Protein sequence | MQSMTSGDPN RGAASETRPH RTARRSPTLT VPVSWYTPLA DDGRGQARAI PGRPGTHFAG GHARPRSRRT HRASLQRIDR FPASPVADFN LRRCRRCFDP PIHYSYGQLS QHGSILWKEG AKKRLMKFIL KFVLLVVVVA LIPASVWFVV TQPIVTMPSS APTKAAPAAV DTARLEGHVR TLSQTLHPRN GGNRENMNRA AAYIRQEFQN AGGRVVEQAF DDEGSVYRNV SAHFGPETDE RIVVGAHYDA FGDSPGADAN AGGVAGLIEL AGLLGKTGLK TQVELVAYAL AQPPYWGTPR MGSAVHAFSL RTQNRAVRVM ICLDMIGCFS DREGSQKYPV QQLEWLYSSK GNFIAVVGNL GQIDEVRRVK TAMTGASPLP VFSVNAPLFF SGIDFSDHRN YWQADYRAVA ITDTAALRNP NYRTARDTAD TLDYKRMGMV VQGVHAAVIA FDR
|
| |