Gene Sfum_3436 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_3436 
Symbol 
ID4458239 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp4197094 
End bp4197828 
Gene Length735 bp 
Protein Length244 aa 
Translation table11 
GC content59% 
IMG OID639704206 
ProductFHA domain-containing protein 
Protein accessionYP_847542 
Protein GI116750855 
COG category[T] Signal transduction mechanisms 
COG ID[COG1716] FOG: FHA domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00012558 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCCTATGG TGAAGATGAA ATTCGAGGGG GAGCCGGTGC GGGAATTCTG GATCGGGAGG 
GGAGGGTTCC TGAGCATCGG CAGGGAAAAG AGCAACGACG TCGTCATCGA CAACCTTGGC
GTCTCGCGCT TCCACGCCAA GATTGATTCC GTGGACGATC GCTTCCTGCT CACGGATCTG
GACAGCAAGA ACGGCACCTA CGTCAATGAA GCGCCCGTCA CTTCGCATTG GTTGAGCCAC
GGGGAAGTCA TCACCATCGG CAAATATACC CTGGCGTTCA TATGCGATGA CGCTCCGGTT
CGACCCGGGG CAGATGACGA GTCTCCCCTC GAGCAGACCA TGATGCTGAG CTCCGAGAAA
CGCCAGGAAC TGGTTGCGCG AAGTGCTCCG AAAATTTCCG GCGTCGAGGT CGAAAAGGAG
GAAGTGGGCG TCCTGTCTTT CCTTGCGGGC GGAAGCGGTG AGATGACGCT GCAGAAAAAA
CTGACCAAGA TCGGCAAGGA TGCGCTCAGC GACATCGTCG TGAGCGGCCT GCTGGTGGGC
AGGACCGCGG CCGCCGTCAG CAACCGGCCC ACGGGATATT ACCTCAGCTA CGTCGGCGGG
CTTGCCAAGC CGAAGGTCAA CGGCGAAACC GTGCGGGAGT CCGTCAAGCT CAAGGAGTTC
GACGTGATCG AGGTCGGTTC GGCAAAAATG CAGTTCCTCC ACAAGTTCGT GAGCAAGGAA
CAGGCCGGCG CGTGA
 
Protein sequence
MPMVKMKFEG EPVREFWIGR GGFLSIGREK SNDVVIDNLG VSRFHAKIDS VDDRFLLTDL 
DSKNGTYVNE APVTSHWLSH GEVITIGKYT LAFICDDAPV RPGADDESPL EQTMMLSSEK
RQELVARSAP KISGVEVEKE EVGVLSFLAG GSGEMTLQKK LTKIGKDALS DIVVSGLLVG
RTAAAVSNRP TGYYLSYVGG LAKPKVNGET VRESVKLKEF DVIEVGSAKM QFLHKFVSKE
QAGA