Gene Sfum_3425 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_3425 
Symbol 
ID4458261 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp4188973 
End bp4189749 
Gene Length777 bp 
Protein Length258 aa 
Translation table11 
GC content58% 
IMG OID639704196 
Productubiquinone biosynthesis O-methyltransferase 
Protein accessionYP_847532 
Protein GI116750845 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2227] 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase 
TIGRFAM ID[TIGR01983] ubiquinone biosynthesis O-methyltransferase 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000129288 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCGGATCG ACAATGAAGT ATACCAGACG TACGGCCATG AATGGTGGTC CGAGAATGCC 
GGCTTCAATG TGTTCAGCCT CAGATATTGC ATGAATCCCG TGAGGTACGG GTATTTCAAA
CGCAAGCTGC GGGAGCTGCG CCTTCCGGGC GGGACGATCT TGGACGTCGG CTGTGGAGGC
GGTCTTCTGG CGGAGGAATT CGCGCGGGAC GGTTTTGCCG TAACGGGTAT CGATCCGGCG
ACTCGTTCCC TCGAAGCGGC GCGCAAGCAT GCGGCCGACA CCAACCTGGA GATCGATTAT
CGTGAGGGAA AGGGGGAAGC CTTACCGTTT CCCGACGGCT CCTTCGATAT CGTTGCCTGC
TGCGATGTGC TCGAGCACGT GGACGACCTC GGCCTGGTGA TCGGAGAAGT CGCGCGCACG
TTGAGGGCAG GGGGAGTATT CTGCTACGAC ACGGTCAATC GGACCTGGTT CAGCAAGCTC
GCTTTGATCA AGATCAGCCA GGACTGGGGC TTCACCAGCT GGAGCAAACC CAATGTCCAT
GTTTGGGAGA AATTCATCAA ACCGGCCGAG CTTATTGCGG TCATGAACCG CTGCGGGCTC
GCGAACCAGG AGCTGAGAGG CATTTCCGCG AGAAGGAATC CCCTGGCACT GATCGCCGGT
CTGCATGCCC TGAAGAAAGG AAGGCTGAGC AATCGGGAGA TGGCTGCCGT CTTCGCGTTA
CGTGAAAGCG AAGACCTGAG AGCGTCCTAC ATGGGGTATG CCGTCAAAAG TCGCTGA
 
Protein sequence
MRIDNEVYQT YGHEWWSENA GFNVFSLRYC MNPVRYGYFK RKLRELRLPG GTILDVGCGG 
GLLAEEFARD GFAVTGIDPA TRSLEAARKH AADTNLEIDY REGKGEALPF PDGSFDIVAC
CDVLEHVDDL GLVIGEVART LRAGGVFCYD TVNRTWFSKL ALIKISQDWG FTSWSKPNVH
VWEKFIKPAE LIAVMNRCGL ANQELRGISA RRNPLALIAG LHALKKGRLS NREMAAVFAL
RESEDLRASY MGYAVKSR