Gene Sfum_3391 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_3391 
Symbol 
ID4458297 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp4159200 
End bp4160054 
Gene Length855 bp 
Protein Length284 aa 
Translation table11 
GC content63% 
IMG OID639704163 
Productnitroreductase 
Protein accessionYP_847499 
Protein GI116750812 
COG category[C] Energy production and conversion 
COG ID[COG0778] Nitroreductase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0601341 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCATTGA TTCGCGTCGA CAGGGATAAG TGTGACAAGG ACGGGGCCTG CGTGGAAGTG 
TGCCCTCTCG GCATTCTCGC CCTGGATGAG GAAAAGGGGC CGGTGACTCG GCCGGGTTCC
GCCATGCTGT GTATCGGGTG CGGCCACTGC GTGGCGGTTT GCCCTCACGG AGCGCTCGAC
AACGTGAAAA ATCCGCTGCA AAGCCAGGTG CCTTACGAGC GGGCCGAGCT GCCCGACGCC
CGCGCGGCAT TCACGTTTCT GAGAGCGCGC CGTTCGGTGC GGCGCTATCT CGATCGGCCC
GTGCCGCGCG AAACGACGCG GCAACTCCTT GAAATCGCCC GATTCGCTCC TTCGGGCCAC
AACAGCCAGG GCCTCTCGTA CCTTGCAGTC GAAGGGCGCG AGGCGATCGG TGAAATGACC
GTGCTGGTGA CCGAGTGGAT GCGCCGGCTG ATCCGTGAGA AACACCCGAT TGCCCGGAGT
TTTCACATGG AGGCGATCGT CAAGTTCTGC GAAAGCGGGG ACGATCGCAT TCTGAGGAAT
GCGCCCCTTG TGATCGTCGC CATGGCGCCG AAAACGGTGG AGCAGATAGC GCAGATTTCG
ACCTGCCTGG CCCTCGAATA TGTCGAGCTC TACGCTCCGG CCCTGGGCCT GGGGACATGC
TGGGCCGGCT ATGCCCAGGC CTGCGCGCGC GAATATGCAC CGCTCCTGAA GTACCTGAAA
CTCCCGGCGG ACCGGGCCGT CACCGGCATG TTGATGGCGG GGTTCCCGAA ATACCATTAC
CATCGGCTGC CGGAACGCAA CCCGCTGGAT CTCGTGTGGT TCGACGAGAT GGGATCGGCG
CCATCCGGGC CATGA
 
Protein sequence
MALIRVDRDK CDKDGACVEV CPLGILALDE EKGPVTRPGS AMLCIGCGHC VAVCPHGALD 
NVKNPLQSQV PYERAELPDA RAAFTFLRAR RSVRRYLDRP VPRETTRQLL EIARFAPSGH
NSQGLSYLAV EGREAIGEMT VLVTEWMRRL IREKHPIARS FHMEAIVKFC ESGDDRILRN
APLVIVAMAP KTVEQIAQIS TCLALEYVEL YAPALGLGTC WAGYAQACAR EYAPLLKYLK
LPADRAVTGM LMAGFPKYHY HRLPERNPLD LVWFDEMGSA PSGP