Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfum_3386 |
Symbol | |
ID | 4458292 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Syntrophobacter fumaroxidans MPOB |
Kingdom | Bacteria |
Replicon accession | NC_008554 |
Strand | - |
Start bp | 4154995 |
End bp | 4155891 |
Gene Length | 897 bp |
Protein Length | 298 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 639704158 |
Product | ribokinase-like domain-containing protein |
Protein accession | YP_847494 |
Protein GI | 116750807 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0524] Sugar kinases, ribokinase family |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.139536 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGATGTTC TTTGTGTCGG ACATGCGTCA TACGATCTGA TCATGCTGGT GGATCATCAT CCCGGAGAGG ATGAGAAGTG CCTCGCCGCC GGCATGTGGG CCTGCGGCGG CGGGCCTGCC GCAAACGCGG CCGTGACCGT GGCCAGGCTT GGAGGCTCCG GCGCCCTCGC GGCTTATCTC GGGGCCGACG CATACGGATG CCTGCATTTC AGCGAACTGG AAGCGGAAGG GGTTCTCACG GACTTCATTG TTCGCGGGGT TCATCCGACA CCGCTTTCCG TCATTCTCGT CAAGCCCGAC GGCACCCGCA CGGTTGTGAA CCACAGAGCC GCCACCCCTT CCCTCTCAGC CTTCACCCTC GATCTTTCGC TCTGCCGCCC GGGCGTCATT CTCTTCGACG GTCATGAACC GATTATCTCT TCTTCCCTGG CGCGGTCCGC GCGGGCCGCC GGAATTCCCA CGGTCCTCGA CGCCGGCTCG CTTCACGATG GAACCCGGGA ATTGGCCCCC CTGGTCGATT ACCTGGTGGC TTCCGAGAAA TTCGCCCGCC GGTTCACCGG CCGGGATGAT CCGCAACTCG CTCTCGACGT ACTTGGCCGG CTTGCACCCT GCGCGGTGAT CACTCTGGGC GGGAACGGAC TTGTCTGGAA GAAGGGGGAA GCATCGGGCG CGCTGCCCGC CTTCTCAGTA CCCGTGCGCG ACACCACCGG GGCGGGGGAC GTCTTCCACG GCACCTTCGC CCTGGGCATC GCGCAGTCCC TGGAATTTCC CGCGCTACTG CGCTATGCGA GCGCGGCGGC GGCCCTGACA TGCGGGAAGG TCGGCGCGAG GACGGGGATC CCCTGGCGGG GTGAAGTCCA TGATTTTCTT TCGTCCGTGG GACCTGTTTT CGAATAA
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Protein sequence | MDVLCVGHAS YDLIMLVDHH PGEDEKCLAA GMWACGGGPA ANAAVTVARL GGSGALAAYL GADAYGCLHF SELEAEGVLT DFIVRGVHPT PLSVILVKPD GTRTVVNHRA ATPSLSAFTL DLSLCRPGVI LFDGHEPIIS SSLARSARAA GIPTVLDAGS LHDGTRELAP LVDYLVASEK FARRFTGRDD PQLALDVLGR LAPCAVITLG GNGLVWKKGE ASGALPAFSV PVRDTTGAGD VFHGTFALGI AQSLEFPALL RYASAAAALT CGKVGARTGI PWRGEVHDFL SSVGPVFE
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