Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfum_3354 |
Symbol | |
ID | 4457636 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Syntrophobacter fumaroxidans MPOB |
Kingdom | Bacteria |
Replicon accession | NC_008554 |
Strand | - |
Start bp | 4109774 |
End bp | 4111009 |
Gene Length | 1236 bp |
Protein Length | 411 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 639704126 |
Product | ABC transporter related |
Protein accession | YP_847462 |
Protein GI | 116750775 |
COG category | [G] Carbohydrate transport and metabolism [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1134] ABC-type polysaccharide/polyol phosphate transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTGACG TCGTCATATC GGTAGAAGGT CTCGGGAAGA AATACCGGAT CCGCCATGCG CGGGTGGGGC GATACCGGAC GTTCCGCGAG GCTCTGGCTC AGGGAGCGGG CAGGCCTTTC CGGGCATTGC GCAGGGCGCT GGGCGCGCGG TCATTGGGCG GGGAAACGCC CGCCGGCGGC GGCGAACGCC CCTCTTCGGA GGATTTTTGG GCCTTGGAGG ACGTCGGCTT CGAGGTGCGT CGGGGCGACG TCGTGGGCAT CATCGGCCGC AACGGGGCGG GCAAGAGCAC GCTGCTCAAG ATTCTGAGCC GCATCACCGA ACCGACGGCG GGCCGCGTGC GACTGCGGGG GCGCGTGGGG AGCCTGCTCG AAGTCGGCAC GGGATTTCAC CCGGAACTGA GCGGCCGTGA AAACATCTTC ATGAACGGGG CGATCCTCGG CATGACCAGG GCCGAGATCA CCCGCAAGTT CGATGAAATC GTGGCTTTCG CCGAGATCGA GAAGTTCCTG GACACCCCGG TCAAACGTTA TTCGAGCGGC ATGTACGTCC GTCTTGCCTT CGCCGTGGCC GCGCACCTCG ACCCCGAGAT CCTGCTGGTG GACGAGGTGC TCGCGGTGGG GGACGTCCAG TTCCAGCAGA AATGCCTGGG CAAGATGAGC GAAGTGAGCC GGAGAGGCCG GACGGTGTTG TTCGTGAGCC ATAACATGGC GGCGGTGAAC GCGTTGTGCG CGAGGGGGAT ACTCCTGTCG CGCGGCCGCG TCGCCGAGGA CGGGCCGGTG TCCGGGGTCG TGGCGGCTTA CCTGGCCGAT TCCGTCAAGG ATCGCGTGAA CCTGGAGACG GGCCCCTTGA AGTGGGTGGC CGCCAGGCAG ACGATGACGG GTCTGGAGAT CTCCGCGGAA TACGCCTTCG ACCGGCCGGT ATCTCTCCCG TGCCTGGGAT TCGTCATCAG CGACCATTAC GGAAACCCCA TCTTCGGTTG CAACCCGAAG ATGTCCCACA TTCACAGCCT GGAAAACCCC GTCTCGGCGG GCAGCGTCAC GGCCAGCATC CGCTCCCCCG AGTTGCGCAA CGGGACCTAC AGAATGTCCA TATGGTTCGG CGACGGCAAG GTCAACTCGG TGGTGATCAG GGACTGCCTG ACGTTCGACG TTACGAACCT GGCGGAAACC GGTAATCACA GCGCGGCCGT CAACGGCCCG GTCATCGCCC GCTGCGAGTG GGACTTCAGC GGGTGA
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Protein sequence | MSDVVISVEG LGKKYRIRHA RVGRYRTFRE ALAQGAGRPF RALRRALGAR SLGGETPAGG GERPSSEDFW ALEDVGFEVR RGDVVGIIGR NGAGKSTLLK ILSRITEPTA GRVRLRGRVG SLLEVGTGFH PELSGRENIF MNGAILGMTR AEITRKFDEI VAFAEIEKFL DTPVKRYSSG MYVRLAFAVA AHLDPEILLV DEVLAVGDVQ FQQKCLGKMS EVSRRGRTVL FVSHNMAAVN ALCARGILLS RGRVAEDGPV SGVVAAYLAD SVKDRVNLET GPLKWVAARQ TMTGLEISAE YAFDRPVSLP CLGFVISDHY GNPIFGCNPK MSHIHSLENP VSAGSVTASI RSPELRNGTY RMSIWFGDGK VNSVVIRDCL TFDVTNLAET GNHSAAVNGP VIARCEWDFS G
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