| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_3321 |
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| Symbol | |
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| ID | 4458349 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Syntrophobacter fumaroxidans MPOB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008554 |
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| Strand | + |
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| Start bp | 4064760 |
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| End bp | 4067078 |
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| Gene Length | 2319 bp |
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| Protein Length | 772 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 639704093 |
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| Product | lipopolysaccharide biosynthesis |
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| Protein accession | YP_847429 |
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| Protein GI | 116750742 |
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| COG category | [D] Cell cycle control, cell division, chromosome partitioning
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0489] ATPases involved in chromosome partitioning
[COG3206] Uncharacterized protein involved in exopolysaccharide biosynthesis |
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| TIGRFAM ID | [TIGR01007] capsular exopolysaccharide family |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.134805 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACGATT CACTCGAAAA ACGTCCCGGA CAGGAGCATC CCGTCTCCGT CTACGGAGCG
AATCTGCCCA GCGTGGAAAC CAGGGAGTCG CTGCCGGAAT TCGAGGATTC CGCCGATCTG
CGGGACTACC TGGAGATCAT TCTAAGACGC AAGTGGCTGA TTCTCACCTT CCTGTTCGCC
GTGTTCATGA CCGTGCTGGT GGTGAGCCTC AGCATGAAAC CGGTGTTCAG GGCGAGCGGG
CGGCTGGAAA TGAGCCCGAG GTTTCCCAAG GTCACGAAGT TCGAGGATAT CACGGGCGGG
CAGATGTTTT TCACGAGGGA TTTCGTGCAA ACCCAGGTGA AGCTGTTGCA GAGCGGCGCC
CTCGCCCAGC GGGTTTTGCG AAAGATGAAC CTGTTGGAGA CCGATCCGGC TCGAAGCCGG
GAAGCCAAGG CCGAAGGATT GATCGAGAGG TTTCGCAAGA GCCTTTCCGA ATCGCTGCAA
TTCGGCAAGG CGGTGGAAAA GACTCCCGAT CCGTCCATTG CAAGTCTCAA GAAAGAAAAG
GGAATGCAGA GCTGGGTCGG TGGGAATCTG GAAGTGCATC CCGAGCGGGA CACAACCCTG
GTCAACGTTT CGTTCAGCTC CACCGATCCG GCGCAGGCCC GGGACTTCGT CAATACTCTG
ATCCAGGAAT TCATCAGCTG GCAGATGGAC AAAAGAATGG ATGCGGCGAG CTCGGCGAAA
CAACAACTTG AAAAACAGCT GGAAGTGGTC CGCATCCAGC TCGAAAGAGC GGAAAGCAAT
CTGAATGCTT TTGCCCAAAA ATCCGGTATC GTCTCGCTCA GTTCCAACCT GAATCTGATT
TACCATCAGC TCGAGGAGGT CAACAAGGCA CTGACGGTGT CTCAAACCGA ACGCATCGGA
AAAGAATCCG TCTACCTGCA GAGCCTGAAA AGCGGAGTCT CGGCATTGCC GATCGTGGTG
GAAAGCCAGA TGCTGCAGAA GCTTCGCGCC GATTACGTGG CCCTGGCCGG GCAGTACCAG
GAGATGTACA CGATATTCAA GGACGACTAT CCGAAATTGA AGACGCTCAA AGCCAGAATG
GTGGACATCG AGAAGCAGAT CAAAGAAGAA GAAAACCGCA TGCAGCACTC GTTGAAGAAC
GACTATCTGG CTTCGTTGAA AAAAGAAGAG GCTCTGCAAA AGGAGGCGGA AGAGAAAAAA
AACCTGGCCA TGGAACTCAA CGATCGGGCC ACCCAGTTCA AGATTCTCGA ACGGGAGGTC
GAGACCAGCA AGCTCATCCA CCAGAGCCTT CTGGAACGTT CCAAGGAGAT TGACGCCAAT
GTGGGAACGG AGCTGGGAAA CATCCAGGTG GTGGAATACG CATCGCTACC TCTTTCGCCC
TATAAGCCCG ACGTGCGCCG AAACCTGCTT CTGGCCATCG TGATCGGCCT CATCGGCGGC
ATAGGCATAT CGTTCTTCCT CGAATACCTG GACAATACGG TGAAACGTGT CGACGAAATC
ACGGACCGGT TCCACATTCC CGTGCTGGGC GTGTTGCCTC TCGTTGAGAA CGAAGATTTG
CACGATTTGG ATTCCCTGGT CAAAACCAGG CCGAAATCCA GTTTTGCCGA GTCCATCAGG
ACGGCCAAGG TGTCGATTCA GCTGTCAAGT CCCGTCGATC AGCCGCCCAG GACTTTTCTC
ATCACAAGCA CCAGTGCCGC CGAGGGGAAG AGCGCGATAT CGTCGAACCT GGCGCTGGCT
TTCGCCGGGT CGGATGAAAA GGTGCTGCTG ATCGACGCCG ACCTGAGAAA GCCGAGGCTC
CACAAAGTCT TCTCCAACGG CCGAGGATCG AAACAAAAGG GGCTGAGCCA GCTCTTGAGC
GGGATCTGCA ATGTGGGGGA GACGATTCAG ACGACGGGCA CGCCGAATCT GTTTTTCATT
CCTTCGGGGC CCATACCTCC GAATCCCGCG GAACTGCTCG CCTCCAACCG GATGCGCGAC
ATCCTGAAAA CCTTGGGGGA GAGCTTCGAC CGAGTGATTC TCGATGCGCC TCCGGCGGTC
GGATTCGCCG ACGTGCTCGT ATTGGGAAAC TATGTCAACG GGGTGATTCT GGTCAGCATC
CTTGGACACA CCCACCGTGA AGCCCTCCGG ATGTTCCGCA GAAGCCTGTA CAACGTGCGC
GGCAATCTGC TGGGATGCCT GGTGAACAAG CTCAACGTCG GGCACCATTT GGGCGGCTAT
TACTACAAGT ATTACAAATA CTACCATTAC TATTATCAGC AGGCGTACGG CTCGCCACCC
GAGAGTCTTC CCGAACATCC TCCTCAGGAA AGAGCATGA
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| Protein sequence | MNDSLEKRPG QEHPVSVYGA NLPSVETRES LPEFEDSADL RDYLEIILRR KWLILTFLFA
VFMTVLVVSL SMKPVFRASG RLEMSPRFPK VTKFEDITGG QMFFTRDFVQ TQVKLLQSGA
LAQRVLRKMN LLETDPARSR EAKAEGLIER FRKSLSESLQ FGKAVEKTPD PSIASLKKEK
GMQSWVGGNL EVHPERDTTL VNVSFSSTDP AQARDFVNTL IQEFISWQMD KRMDAASSAK
QQLEKQLEVV RIQLERAESN LNAFAQKSGI VSLSSNLNLI YHQLEEVNKA LTVSQTERIG
KESVYLQSLK SGVSALPIVV ESQMLQKLRA DYVALAGQYQ EMYTIFKDDY PKLKTLKARM
VDIEKQIKEE ENRMQHSLKN DYLASLKKEE ALQKEAEEKK NLAMELNDRA TQFKILEREV
ETSKLIHQSL LERSKEIDAN VGTELGNIQV VEYASLPLSP YKPDVRRNLL LAIVIGLIGG
IGISFFLEYL DNTVKRVDEI TDRFHIPVLG VLPLVENEDL HDLDSLVKTR PKSSFAESIR
TAKVSIQLSS PVDQPPRTFL ITSTSAAEGK SAISSNLALA FAGSDEKVLL IDADLRKPRL
HKVFSNGRGS KQKGLSQLLS GICNVGETIQ TTGTPNLFFI PSGPIPPNPA ELLASNRMRD
ILKTLGESFD RVILDAPPAV GFADVLVLGN YVNGVILVSI LGHTHREALR MFRRSLYNVR
GNLLGCLVNK LNVGHHLGGY YYKYYKYYHY YYQQAYGSPP ESLPEHPPQE RA
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