Gene Sfum_3287 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_3287 
Symbol 
ID4458385 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp4025179 
End bp4027266 
Gene Length2088 bp 
Protein Length695 aa 
Translation table11 
GC content61% 
IMG OID639704059 
Productmolybdopterin oxidoreductase 
Protein accessionYP_847395 
Protein GI116750708 
COG category[C] Energy production and conversion 
COG ID[COG0243] Anaerobic dehydrogenases, typically selenocysteine-containing 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCAGGG ACGTATATTC GTTGTGTTTC ATGTGTACGA TACGATGCCC CATCAAGGTG 
ACCGTCGAGA ACGATGAAGT CCTCTGGATC GAGGGAAATC CCCACGTTCC CGGAATCGAA
GGCGCGCTGT GCGCGAAGGG GTCCGCGGGT GTCGCCCTGT TGCAGGACCA TGAACGACTC
CGGCACCCCA TGATCCGCAC CGGTCCGCGA GGCTCCGGAC AATGGCGCAG GGCCTCCTGG
GACGAAGCGC TGGATTTCGT GGCCGACCGC CTGCGCGGCA TCATCGAGCG CCACGGAGCG
CACAGCATAC TCTGGGGAGA GCGCACCAAC CTCAACACGC ACATCAGCAA GGCATTCATG
AAGGGTATCG GATCACCCAA CCACTTCACT CACGACGCCC TGTGCAAAGG CTCGGTGAAC
ACCGCATTTC GCAGCCTCAC GGGGTACGAC GACACACAGG TTGGGGTGGA CTACGCCAAC
ACGAAGCACA TCGTCATGTA CGGACGGAAT CTGTTCGAGG CCCTGGAGAT CAAGGCGATC
AACAATCTCC TGAGCGCCAT GGGAAAAGGC GCAAAACTCA CTTACATCGA CCCCCGAGTG
ACCGTCACCG CCTCGAAAGC GACACGGTAC TGGATGATTC GGCCCGGCAC GGACCTGGCG
CTGAATTACG CCCTCATGCA CGTTATTCTC GAGGAAGGTC TCTTCGACGC CGAATTTGTC
CGGCGATGGG TGCTCGGTCT GGAGGAACTA CGGGCTTTCG TGGAGCCTTT CACGCCTGCC
CGGGCGGAAG AGGAAACGGG GATTCCGGCT GCCGAAATCA CGGCCCTGGC AAGAGAGTTG
GCGGAAGACA AGCCCGCCGT CGCGTTTCAC TACGGGTACC GGGGCGCTCA CCACACGAAC
GAAGTCTACC TCCGGCGTTC GATCATCATG CTCAATGCCC TGATGGGCAG CATCGAAACC
CCGGGTGGAC TGTTTTTCAA GAAAGGAATG AAGACGGCGG GGTATGGAGA GCTGGGCAAG
TACGCCGCCC AGGAATTCCC CAAGATTGCG GGCCCGCGAT TCGACGGGTC CGGCAGCACC
CGGTTCCCCA TCGCCGATCC GGCGCACGGT AATCCTCAAG CCCTGGCTCA GGCCATCCTC
AGCGAACAGC CCTACCCCAT CAAGGCGCTG ATCGCCAATC GCTTCGAACC GCTTCAGTCC
ATCCCCGACG CCTCCGCAAC CCGCGAGGCT CTCGACAAAC TCGATCTGCT GGTCTCCATC
GACATCAACA TGAATGAATT CGCCTGGTGC GCCGATGTGG TGCTCCCGGA ATCCATGTAC
CTCGAACGCG GGGATTCCAT CCAGGCGGTG TCCGGGCTCA AACCCCAGCT CTGCATCCGC
CAACAGGCGG TGACGCCCCG ACACGACACA AAACCCGGAT GGCTCATCGT GAAACAACTG
GCCGACCGGC TCGGCGCAGG TAAGTATCTT CCCTTCGAAA CCATCGAGGA CATCTGGAAC
TTTCAGCTCC AGGGTACCGG TCTGACGGTG GAGGAGCTTC AGGCGAGGGG GTTCATCTCC
TTGACCGAGA AACCGATTTT CTGGGATAGA GCAAACGGAC TGCCGTTCAA GACGCCCTCG
GGCAAGATCG AGTTTGTCAG TTCCCTGCTG GAGAATGCCG GTTTCCCCTC GTTTCCCGCA
TACGCCAGGG TCGAGCCGCT TTCCGAAGGG TCCTTCAGGC TGCTCGTGGG CCGTTGCGCC
GTTCACACCC ACGGCTCGAC TCAGAACAAT CCCTATCTCA ACGAGCTTGT CTCCGAAAAC
GAGCTCTGGA TCAATTCCTC CGCCGCGGCG CGACTCGGCA TCACGGACGG CTGCCCGGTC
GAGGTCTCAT CTTCCCGAGG CGCGGCCACC ATCAGGGCGA AGGTCACGGA GTTCATTCAC
CCCGAGGCGG TCTTCATGCT CCATGGATTC GGCAACACCG TGCCGGTCCA GACTCGCGCT
TGCATGAAAG GAGCCAGCGA CGCGCTGCTC CAGGAAAACG TTTCCGATTT TGCGGGCGGG
AGCCCGGCAC TTGACGAGAC GCAGGTGCGG GTGAAGCGGC TCGATTGA
 
Protein sequence
MTRDVYSLCF MCTIRCPIKV TVENDEVLWI EGNPHVPGIE GALCAKGSAG VALLQDHERL 
RHPMIRTGPR GSGQWRRASW DEALDFVADR LRGIIERHGA HSILWGERTN LNTHISKAFM
KGIGSPNHFT HDALCKGSVN TAFRSLTGYD DTQVGVDYAN TKHIVMYGRN LFEALEIKAI
NNLLSAMGKG AKLTYIDPRV TVTASKATRY WMIRPGTDLA LNYALMHVIL EEGLFDAEFV
RRWVLGLEEL RAFVEPFTPA RAEEETGIPA AEITALAREL AEDKPAVAFH YGYRGAHHTN
EVYLRRSIIM LNALMGSIET PGGLFFKKGM KTAGYGELGK YAAQEFPKIA GPRFDGSGST
RFPIADPAHG NPQALAQAIL SEQPYPIKAL IANRFEPLQS IPDASATREA LDKLDLLVSI
DINMNEFAWC ADVVLPESMY LERGDSIQAV SGLKPQLCIR QQAVTPRHDT KPGWLIVKQL
ADRLGAGKYL PFETIEDIWN FQLQGTGLTV EELQARGFIS LTEKPIFWDR ANGLPFKTPS
GKIEFVSSLL ENAGFPSFPA YARVEPLSEG SFRLLVGRCA VHTHGSTQNN PYLNELVSEN
ELWINSSAAA RLGITDGCPV EVSSSRGAAT IRAKVTEFIH PEAVFMLHGF GNTVPVQTRA
CMKGASDALL QENVSDFAGG SPALDETQVR VKRLD