Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfum_3258 |
Symbol | |
ID | 4458426 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Syntrophobacter fumaroxidans MPOB |
Kingdom | Bacteria |
Replicon accession | NC_008554 |
Strand | - |
Start bp | 3990949 |
End bp | 3992061 |
Gene Length | 1113 bp |
Protein Length | 370 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 639704030 |
Product | cobalamin B12-binding domain-containing protein |
Protein accession | YP_847366 |
Protein GI | 116750679 |
COG category | [R] General function prediction only |
COG ID | [COG5012] Predicted cobalamin binding protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTCAACC GAATCATCTC GGAAGCGAAG ACGTTGACTC ACATGCCGCT TGAAGCGGCG ACCGTTTACG ACACCTTCAA GGGGCGTATG ATCGAGCAGG TCGACCGGGA GTTGACCGCG CTTCCTGCCA TCCATGTCCT GATCGGCCAC AACCCTCTGT CGATGATGTA CGAGCATCAC CGCAACCACG CGCGTCTCAT GCTGGGGGTT TTTGCCCTGA ACCGGTTTGA CCTGTTGGCC GGAACCGTGC CGTGGTCATA CCGGGCCTGT CACGCCCATG GATTTTCATA CGAATATTTT CGGGTCGAGC TGAAAGCCTG GAAACGAGCG GTGGCGCGGC ACATCGACGG GCTCTGCGCC CGGGCGATAC TCGAGGTCTA TGACTGGATC CTGCGGAGGC ACGGTGAAAT GATCCAACTG GCTGAACAAA GCTGCGGGCC GCCGATTGCA GCGGGATCTC CTCTGGATGA AACGGGGCAC GCCTTCCTGT CGGCAGTGTT GGCAGGAGAC CGCCGGGAGT GCCTTCGCCT CGCCGGGAAC TCGGCCGCGA CACCGCAAGG GCTGGAATCC TTCTACCTGG AGGTCGTTCA GCCCTGTATG CACGAGCTGG GACGCCTCTG GGAGCAGGGA GAGATTTCGG TGGTGCAGGA AAACCTGGCC ACAGCCATGA TGTCCGGTGT GATGGCGACG ATCCGCCCGC GCGTGAGGAT CGACGCCCCC GAACGTGGAA AAGCCGTCGT CACGTCCGCT CCAAACGAAA CCCACACCTT GGGCGCATGG CTCATCTCGG ATCTTCTCAG CCTGGACGGC TGGGAGGTGG ACTACCTCGG TGCCGCCTCC TCCCGGCCGG ACATCATTGA CGTGCTTTTG AGCGTCAGGC CCGATCTTCT CGCCATTTCC GTAGCCATGC CGTACAACCT GCACCCGGCG ATGAAGCTCA TGGCAGTCGT GCGAAAGCAG CCCGCGCTGG CTGGAATCAA AATCATGATC GGCGGTTATT TCACCCGAAT CATCCCCGGT CTCGATCGGC TGGCGGGTGC GGACGGAGTG GCGTCCGACG CGAAATCGGC CATTGCATTG GCTGGAGAAT GGAGGCGATC ATGCACAGGA TGA
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Protein sequence | MLNRIISEAK TLTHMPLEAA TVYDTFKGRM IEQVDRELTA LPAIHVLIGH NPLSMMYEHH RNHARLMLGV FALNRFDLLA GTVPWSYRAC HAHGFSYEYF RVELKAWKRA VARHIDGLCA RAILEVYDWI LRRHGEMIQL AEQSCGPPIA AGSPLDETGH AFLSAVLAGD RRECLRLAGN SAATPQGLES FYLEVVQPCM HELGRLWEQG EISVVQENLA TAMMSGVMAT IRPRVRIDAP ERGKAVVTSA PNETHTLGAW LISDLLSLDG WEVDYLGAAS SRPDIIDVLL SVRPDLLAIS VAMPYNLHPA MKLMAVVRKQ PALAGIKIMI GGYFTRIIPG LDRLAGADGV ASDAKSAIAL AGEWRRSCTG
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