| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_3251 |
|---|
| Symbol | |
|---|
| ID | 4458419 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Syntrophobacter fumaroxidans MPOB |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008554 |
|---|
| Strand | + |
|---|
| Start bp | 3981962 |
|---|
| End bp | 3982438 |
|---|
| Gene Length | 477 bp |
|---|
| Protein Length | 158 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 639704023 |
|---|
| Product | ferric uptake regulator family protein |
|---|
| Protein accession | YP_847359 |
|---|
| Protein GI | 116750672 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0735] Fe2+/Zn2+ uptake regulation proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAATGG AAAATGTGCT CCAGCCTCGA GCCTTCAGAA TGACCTCCCA GCGGAGGACG
ATCCTGGAGG AGCTCAGAAA CTGCCGGTGG CATCCCACCG CCGACGAGGT CTATGAGCGG
GTGCGCCGAA AGTTGCCCAG AATCAGTCTG GGGACCGTTT ACCGGAACCT GGAGGTTCTC
GCCCTTCAAG GCACCATACG TAAGCTGGAC ATCTGCGGAA GGCAGAAGCG CTTTGACGCC
GATCCGCGGA TGCACTGCCA CGTCAGGTGC CTTGAGTGCG GCGCCATGGA TGACCTGCCG
CTCGGAGATT CGACTTTATC CCGGGCTATC GGTGAGATCG ACGCTTCCTA TGAGATTCGT
GAGGTTCGCT TGGAATTCCT GGGCCTTTGT CCGAAATGCA AGGCACCGGA GCGTGCCTGC
CGGGACAGGG ACACCCGGAG GGGGCACTCC GGCGGGGTGG GCCGGCCGGA CACGTAG
|
|---|
| Protein sequence | MKMENVLQPR AFRMTSQRRT ILEELRNCRW HPTADEVYER VRRKLPRISL GTVYRNLEVL
ALQGTIRKLD ICGRQKRFDA DPRMHCHVRC LECGAMDDLP LGDSTLSRAI GEIDASYEIR
EVRLEFLGLC PKCKAPERAC RDRDTRRGHS GGVGRPDT
|
|---|
| |