| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_3243 |
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| Symbol | |
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| ID | 4458411 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Syntrophobacter fumaroxidans MPOB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008554 |
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| Strand | + |
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| Start bp | 3971504 |
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| End bp | 3973858 |
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| Gene Length | 2355 bp |
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| Protein Length | 784 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 639704015 |
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| Product | PAS/PAC sensor signal transduction histidine kinase |
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| Protein accession | YP_847351 |
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| Protein GI | 116750664 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG4585] Signal transduction histidine kinase |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTGATC GGGACACCCC AGAGGATCTG TTGCGCCAGG AGATAGCCCG GTTGCGGGAA
CGCATCAGGC ATTTGGAGCG CGCGGAATCC TCTGCCCGGC AGATGGAGAA GTTTCTCCGG
GAGAGCCGAC AGAGATTCAA ACAGATCTTT TCCGCCTCAC CCATTTGCAT CGAGCTCTAT
GACGAGAACG GAATGCTGGT CAACGCCAAC CGGGCCTGTC TGGAGATGTT CGGAGTGCCG
GGGTTTTCGG CGGTCAAGCA CTTTGATCTC TTTAAGGATC CCAATCTTCC GGAAGACGTC
ATTCGGTGTC TGCGTGAGGG CATGACGATG CGCTTGGAGG TGCCGTTCGA TTTCAACCGG
GTTCGGGAGC TGGAACTCTA TCCCACCTCT AAGGAAGGGC TTGTTTACCT GGACGTGCTG
ATCGCCCCTC TCATCTCGGA GGAGGGCGGC AAGCCTTCGG GTTACCTGGC CCAGGTGCAG
GACATCACCG AAAAACTCGG CATGATCCGG GAGCTCCAGG ATAACGAAGC CCGCTTCCGC
GGCATTATAG AAGACCAGAC GGAACTGATC ATCCGGTTTC AGCCCGATGG TCGACTCACG
TTCGTGAACG ACGCCTACTG TCGATATTTC GAAAGGAGCA AGGAGTTTTT TCTGGGCCGG
AACTATCTCG GCAGCGTTCA TTCAAAAGAT CGACCGCTCC TCAAAAAGGT GCTCACGTCG
CTGACCCGGT CGCACCCGGT GGAGATGGTG GAGCAGAGGT CGTTACGCTG CAACGAAAAG
CTTTGCTGGC AGCAATGGAG CTACCGTGCC ATTTTCGACG GCTCGGGCAA GTTGACGGAG
TACCAGGCGG TGGGGAGGGA CACTACCGAC CGCAAGATGC TCGAAGAGAT TTGGAAGAAA
TACGAGTTCA TCGTCAATAC CTCGGGGGAC ATCATGGTTT TGATCGCTCC GGATTACACC
TACGAGGCGG TCAATACGGC GCTGTGCAAG GCTGTGGGAG CGGGCCGCGA GGAGATCGTC
GGCCGCGGGC TGGGTGAAAT CTGGGGGGAA GAGTATTTCA ATGAAAACCG AGGCTACCTG
GACCGTTGCT TCAAGGGGGA GGTTGTTCAC TACGAGCTTT GGACACCCCA CAAGGAGGAA
GGGCCGAGGT TTTACGGCGT TTCCTGCTAT CCCTATTACG GTCGTCGGGA TCGGGTCACT
CACGTGGTAT CCGTGTGCCG CGACATGACC GACGCCCGGC TGGCCAAAGA AGCGCTGCAG
AGGTCCGAGG AGAAATACCG CAGCATCTTC GAGCACGGGG TGATCGGCAT TTTTCAGGCG
ACGCTGCAGG GAAAACACCT GAGTCTCAAT CCTGCTTTCG CGCGCATGTT GGGCTACGAA
TCGCCGGAAG AGGTGATGCG GCTGGTCAGC AATATTGCCG AACAGGTGTA CGCCGATCCC
CGGCAGAGGA CCGAGCTGCT GAAAAGGCTT GCTGAAGGGG GTGAACTGGT CAAGGTCGAG
AGCGATCTGC TGCGCAAGAA CGGCAAGAGC ATCACGGTGA ATCAAAATAT CCGCCTGGTC
CGGGATGAGA AGGGAAATCC CCTGTACCTG GAAGGCTTTA TCGAGGACAT CACGGAACGC
AAGAAGCTCG AAATGGCGAT CAAGGATTCG GAGCGGCAGC TCAAGTATCT TTCATCACGT
TTGCTGACGG CACAGGAGGA GGAGCGGAAA AGAGTCGCCG CCGAGCTTCA CGACAGCATC
GGGCAGTCGC TTGCGGCAAT CAAGTACGGA GTGGAAAACG CCGTGCGGTA TGGAGCCTCC
GCGGGGGAGG AGACGGTTTT TCACTCACTG GGTCTGTTGA TTCCTATCAT CCAGGGCGCC
ATCGAGGAGG CACGCAGGCT TTACATGGGG CTGAGGCCTT CGATGCTCGA CGACCTGGGG
GTCATCGTGA CCATCGACTG GCTGTGCAAG GAATTTCGTC GAAACTATCC GGAAATGAGG
ATCAGTGAGC GTATCGAGCT TGAAGAGGAC TGCATTCCGG AGTCTCTCAA AATCGTGATT
TTCAGAGTCG TCGAGGAAGC TTTGAACAAC ATTTCAAGGC ACAGCCGGGC CGAGGGCGTG
GAGGTCGCGC TGTCGATCTC CGGGGGTGCG ATTCGACTCG ATGTTGCCGA CGATGGCGTG
GGCTTTGATC AGGACAGCCT TCATCATGCC GTTGAAAGCG AGAAAGGTTT CGGCCTCGCG
GGAATGAGAG AAAGGGTGGC TCTCTCCGGC GGTTCCCTCA GTGTCAGCTC AATCCGCGGC
AAAGGGACGA CCGTCAGCGT TTCCTGGCCC GTGCCGGCAT CCCTTGGAAA GGCGAAACCG
CCCCGCCGGC ACTGA
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| Protein sequence | MSDRDTPEDL LRQEIARLRE RIRHLERAES SARQMEKFLR ESRQRFKQIF SASPICIELY
DENGMLVNAN RACLEMFGVP GFSAVKHFDL FKDPNLPEDV IRCLREGMTM RLEVPFDFNR
VRELELYPTS KEGLVYLDVL IAPLISEEGG KPSGYLAQVQ DITEKLGMIR ELQDNEARFR
GIIEDQTELI IRFQPDGRLT FVNDAYCRYF ERSKEFFLGR NYLGSVHSKD RPLLKKVLTS
LTRSHPVEMV EQRSLRCNEK LCWQQWSYRA IFDGSGKLTE YQAVGRDTTD RKMLEEIWKK
YEFIVNTSGD IMVLIAPDYT YEAVNTALCK AVGAGREEIV GRGLGEIWGE EYFNENRGYL
DRCFKGEVVH YELWTPHKEE GPRFYGVSCY PYYGRRDRVT HVVSVCRDMT DARLAKEALQ
RSEEKYRSIF EHGVIGIFQA TLQGKHLSLN PAFARMLGYE SPEEVMRLVS NIAEQVYADP
RQRTELLKRL AEGGELVKVE SDLLRKNGKS ITVNQNIRLV RDEKGNPLYL EGFIEDITER
KKLEMAIKDS ERQLKYLSSR LLTAQEEERK RVAAELHDSI GQSLAAIKYG VENAVRYGAS
AGEETVFHSL GLLIPIIQGA IEEARRLYMG LRPSMLDDLG VIVTIDWLCK EFRRNYPEMR
ISERIELEED CIPESLKIVI FRVVEEALNN ISRHSRAEGV EVALSISGGA IRLDVADDGV
GFDQDSLHHA VESEKGFGLA GMRERVALSG GSLSVSSIRG KGTTVSVSWP VPASLGKAKP
PRRH
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