Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfum_3223 |
Symbol | |
ID | 4458461 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Syntrophobacter fumaroxidans MPOB |
Kingdom | Bacteria |
Replicon accession | NC_008554 |
Strand | - |
Start bp | 3942657 |
End bp | 3945101 |
Gene Length | 2445 bp |
Protein Length | 814 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 639703995 |
Product | heavy metal translocating P-type ATPase |
Protein accession | YP_847331 |
Protein GI | 116750644 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG2217] Cation transport ATPase [COG2608] Copper chaperone |
TIGRFAM ID | [TIGR01494] ATPase, P-type (transporting), HAD superfamily, subfamily IC [TIGR01511] copper-(or silver)-translocating P-type ATPase [TIGR01525] heavy metal translocating P-type ATPase |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGTGCG CGGCCTGCGT GCGAAGGGTG GAGCAGGGGT TGAAGGAGCT CGAGGGAGTT CGCGACGCCT CCGTCAATTT CGCAACGTCC AGGGCGTCGG TGGACTATGA CCCCGAAGTC TCCGGCACCG AGGCCATCGC GGAAAGAATC AGGGATATCG GCTACGAACC CGTCTCCATC GATTCGGCCG AGGACGAGAA GCTGCGCAAG ACCACTCTCC TGGTGGGGGG GATGAGCTGC GCGGCCTGCG TGCGCCGCGT CGAAAACGCG CTCAAATCGG TACCGGGGGT TGACCGGGCG GCCGTCAACC TGGCGTCGTC GAGGGCGACC GTTTTCCATG ATTCGCGCGT TGCCCCGGTT GCATCCCTGA GAGCCGCCGT CGAGGACGCA GGGTATGAAT ACCTGGGCCT GTTCCGGGAG ACCCCGCAGG AGGATCCGGT GGAAGCCGCG CGGGACCGGG AGCTTCGGGA CCTGCGCGTC AAAGTCGCGG TCGGCGCGGT GCTGAGCGTC GTCATCATGA CGGGAAGCAT GCAGCACTGG TTTCCCTTCC TGCATGGAAT ACCCCGGGGG ATCATGCAGG TCGCGCTCCT TGTCCTGACC ACTCCGGTGG TTTTCTGGGT GGGCGACCGG TTCCTCATCG GGGCACTCAA GGCCACACGC CGGAAGTCGG CCGACATGAA CACCCTGGTG GCCATCGGAG CGTTTTCCGC CTACGTCTAT TCGACCCTGG CCACTCTGTG GCCCGCCTTT TTTGCCTCAG CGGGGATCGA AACGCACGTC TACTTCGACG GCGCGGCCAT GATCATTACG CTGGTACTTC TGGGACGGCT GCTCGAGATG AAAGCGCGCG GAAGGACCAC CGCCGCCATC AAGAAGCTCA TGCAACTGAC CCCGAAGACG GCCCGGGTGA TCCACGGCGA CCGTGAAATG GACATCCCCG TGGAGGAGGT TGTCGAGGGC AACCTGATCC TGGTGAAACC GGGCGGCAGG GTCCCCACCG ACGGCCGGGT GGAGACGGGC GCCTCGGCGG TGGACGAATC CATGCTCACG GGTGAGAGCA TCCCGGTGGC CAAGGAACCC GGGAGCAACG TCTTCGCCGG AACCATCAAC CAGACCGGGA GTTTCACCTT TCGGGCGACG CGCGTGGGGT CGGAAACCGC CCTGGCCCAG ATCATTCGGC TCGTGGAGGA AGCCCAGGGC TCCAAGGCTC CGATCCAGTA TTTCGCCGAC CGGGTCGCCG CCGTCTTTTC CCCGGCGGTG ATCGCCATTG CCCTGGTCAC TTTCTGCATC TGGTATTTTG TCGTGCCCGG CGACACGTTC AGCCGCGCGC TGCTCAACTT CGTCTCCGTT TTGATCATCT CCTGCCCCTG CGCCATGGGG CTCGCCACTC CGACGGCGGT CATGGTCGGC ACGGGCCTGG GGGCCGAGAG CGGCATTCTC ATCAAAGGCG GCGAGAGCCT GGAACGGGCC CACGAGCTCA CCACCGTGGT CTTCGACAAA ACCGGAACGC TCACCAACGG AACCCCGGAA GTTACCGACG TCATTACCGC GCCCGGAATG CAACGCAGCG AATTGCTGAC GCTGGCGGCA TCCATCGAAG CGGTTTCGGA GCACCCCCTG GCACGCGCCG TCGTCGAACG CGCAAGCGCG GAAGGTTGTG CCCCTCTTCC GGTGGAAGAT TTCCGCGCGC TGTCCGGCCT GGGCTCGCGG GGACTTGTGA ACGGCAGGGA AGTGATGGTC GGCAGCGCCC GGCTGCTCGC GGAGCATTCC GTCGATTTCG GGGAGTTGAA CACTCAGGCC GAGACCCTGG TTGCAGCCGG CAGGACATGC GTTTACGTGG GAGCGCAACG GCGCATCATC GGCGTGATCG CCCTTGCCGA CGGGGTCAAG GAGTCCGCCG TCGCGGCCGT CGCCCGCCTG CGGGAACGCG GCATGGAAGT GGCCATGATC ACCGGAGACC GCAAGGAAAC GGCATTGGCC ATAGCGAAGG TGGTGGGAAT CGAACGCGTG ATGGCCGAAG TCCTGCCAGG CGACAAGGCC GGCGAAATCC GCAGGCTGCA AAATGAGGGC AAAGTCGTTG CGATGGTGGG TGACGGCATA AACGACGCCC CCGCCCTGGC GGCCGCCGAT GTCGGCATCG CCCTGGGCGC CGGGACCGAC GTGGCCATGG AAGCCGCGGA TATTACCCTC ATCAAGGGAG ATCTCCGGCT GGTGGTGTCG GCCATCGAGC TTTCATCCCT CACCATGAGG GTCATCAAGC AGAATCTGTT CTGGGCCTTC TTTTACAACT CGCTCGGCAT CCCCGTGGCG GCGGGAGCGC TCTATCCCTT TTTCGGCATC CTGCTCGATC CCATGTTCGC CGCGGGGGCC ATGGCACTCA GTTCGGTTTC CGTAGTGAGC AACGCGCTCC GTCTCAAGCG GCTTTGGGGA AAGCGACGAA ACTGA
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Protein sequence | MTCAACVRRV EQGLKELEGV RDASVNFATS RASVDYDPEV SGTEAIAERI RDIGYEPVSI DSAEDEKLRK TTLLVGGMSC AACVRRVENA LKSVPGVDRA AVNLASSRAT VFHDSRVAPV ASLRAAVEDA GYEYLGLFRE TPQEDPVEAA RDRELRDLRV KVAVGAVLSV VIMTGSMQHW FPFLHGIPRG IMQVALLVLT TPVVFWVGDR FLIGALKATR RKSADMNTLV AIGAFSAYVY STLATLWPAF FASAGIETHV YFDGAAMIIT LVLLGRLLEM KARGRTTAAI KKLMQLTPKT ARVIHGDREM DIPVEEVVEG NLILVKPGGR VPTDGRVETG ASAVDESMLT GESIPVAKEP GSNVFAGTIN QTGSFTFRAT RVGSETALAQ IIRLVEEAQG SKAPIQYFAD RVAAVFSPAV IAIALVTFCI WYFVVPGDTF SRALLNFVSV LIISCPCAMG LATPTAVMVG TGLGAESGIL IKGGESLERA HELTTVVFDK TGTLTNGTPE VTDVITAPGM QRSELLTLAA SIEAVSEHPL ARAVVERASA EGCAPLPVED FRALSGLGSR GLVNGREVMV GSARLLAEHS VDFGELNTQA ETLVAAGRTC VYVGAQRRII GVIALADGVK ESAVAAVARL RERGMEVAMI TGDRKETALA IAKVVGIERV MAEVLPGDKA GEIRRLQNEG KVVAMVGDGI NDAPALAAAD VGIALGAGTD VAMEAADITL IKGDLRLVVS AIELSSLTMR VIKQNLFWAF FYNSLGIPVA AGALYPFFGI LLDPMFAAGA MALSSVSVVS NALRLKRLWG KRRN
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