Gene Sfum_3186 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_3186 
Symbol 
ID4458493 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp3909037 
End bp3910014 
Gene Length978 bp 
Protein Length325 aa 
Translation table11 
GC content62% 
IMG OID639703958 
Producthypothetical protein 
Protein accessionYP_847294 
Protein GI116750607 
COG category[S] Function unknown 
COG ID[COG4241] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.46732 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGCCTGT TCAGCCAAAA CAACGGCTTC GACCGTAATC CCGGCCTGGG AATGGAGATC 
GCCGTCGGCA CGACGGCGAC GTTGATCTCG TTCCTGGCCA TTCTTCTCAT CCCGGTTGCG
GGCGTCGTCG CGGGCGTGCT GACTCCCCTG CCCACTCTGC TCTCGCTTTA CAGGAGAGGG
CGGCCGATGG GCTACTGGGG CCCCGGCGTG ACCGTTCTGG CGGGTGTGTT GTTGTTGGTG
GTCCTGGGGA TGCCGCAGAT CGTGCCGTAT TTTTGCCTGC TGCTTTCCAT GGGAGTGCTG
ATGGGGCTGG GCATGAGGCG GCAATGGTCC ATCGAGAAGA CGATCGGAGT GCCCACCCTG
TTTGTATTTG TGGCCGGCGC GTTCCTGTTC TGGCTCGCTG CGGGGGATTC CGAAACCGGA
TTCGCGGGTT TCGTCGAGGA GGATTTGCGC AACTCCATTC GTGCCGCCAT GCAGCAGTAC
GGTGGGGAAG GCGAGGAGAA GAAGGTCCTC GAGCAATCCC TGCAAAACAT GGTCCCCTTT
CTGGTCAAGC TCCTGCCGGG CGCGGCCGTG TCCACCACTC TGCTGGCGGC ATGGTTCAAT
GTCGTGGCCG CGAGGCGCTA CTGCCGCATG GCCCGGCTCC CCTTTCCGGC CTGGGGACAG
TGGCTCGAAT GGAAGGCTCC GGATCATTTG ATCTGGGGAG TGATCGCGGC CGGAGTGATG
CTGCTGGTGC CGGGCAAGAC GCTCACGGTG GTGGGACTGA ACCTCCTGCT CATTCTGGCC
ACCGTGTACC TGTTCCAGGG TCTGGCCATA TTGGGGTTTT ACTTCGAGCG ATGGAAGATG
CCCCGGGCGA TGAGACTCCT CAGCTACGGC ATCGTTTTGC TTCAGCAGTT CGCGACGATG
GCCGTGATCC TGCTGGGCCT CTTCGACCTG TGGTGCGATT TTCGGCGCCT GACCCGGAAG
CCGGCGGAAA GCCCTTGA
 
Protein sequence
MGLFSQNNGF DRNPGLGMEI AVGTTATLIS FLAILLIPVA GVVAGVLTPL PTLLSLYRRG 
RPMGYWGPGV TVLAGVLLLV VLGMPQIVPY FCLLLSMGVL MGLGMRRQWS IEKTIGVPTL
FVFVAGAFLF WLAAGDSETG FAGFVEEDLR NSIRAAMQQY GGEGEEKKVL EQSLQNMVPF
LVKLLPGAAV STTLLAAWFN VVAARRYCRM ARLPFPAWGQ WLEWKAPDHL IWGVIAAGVM
LLVPGKTLTV VGLNLLLILA TVYLFQGLAI LGFYFERWKM PRAMRLLSYG IVLLQQFATM
AVILLGLFDL WCDFRRLTRK PAESP