Gene Sfum_3133 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_3133 
Symbol 
ID4458543 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp3846176 
End bp3849223 
Gene Length3048 bp 
Protein Length1015 aa 
Translation table11 
GC content62% 
IMG OID639703904 
Product4Fe-4S ferredoxin iron-sulfur binding domain-containing protein 
Protein accessionYP_847241 
Protein GI116750554 
COG category[C] Energy production and conversion 
COG ID[COG1148] Heterodisulfide reductase, subunit A and related polyferredoxins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAGACTA GCAACGGCAG TACATTTGGA TCGGTTATGG TCGTGGGTGG CGGCGTTGCC 
GGCATCCAGG CCGCACTGGA CCTCGCCAAC GCGGGCTTCT ACGTCTACCT GGTGGAAAGG
GCATCCGCGA TCGGCGGGGC GATGTCGCAG TTGGACAAGA CGTTTCCCAC CAACGACTGT
TCGATGTGCA TCCTTTCTCC CAAACTCGTG GAGTGCGGCA GCCATCCGAG CATCCGGCTC
CTGACCACGA GCGAGTTGAC GGCCCTGGAG GGTGATGTGG GGCGCTTCCG GGCCAAGGTC
CTTCAGCATC CCCGCTACGT GGACCTCTCG AAGTGCATTT CCTGTGGCGC CTGCGCCGAG
AAATGCCCCG CCGTGGTGAG TGATGCCTAC AACGCCGGGC TCGGAAAGCG CAAGGCGATC
TACAAACTGT ACGCGCAAGC GACCCCTTCC GGATACGCCA TCGATGCCGC CAACTGCCGC
AGGATCGGGC GGGGAAAGAA ATGCAGCGTC TGCGCCAAAT TCTGCCCTGC CGGCGCGGTC
GACTACACCC AGCAGGAGCA GGTGCTCGAT CTCGAAGTGG GGGCGGTGAT TCTGTCCGCC
GGGTTCCAGG CCTTCGATCC CGCCGGGCTG GACACTTACC TGTACAACGA TCATCCCAAC
GTGGTCACGA GTCTCGAGTT CGAGCGCATC CTCAGCGCCT CGGGCCCGTT CATGGGGCAC
CTGGTCCGGC CTTCGGATCA CGCGGAGCCT CGCCGGATCG CATGGATTCA GTGCGTCGGA
TCGCGCAACG TCAATCACTG CGAGAACGGC TATTGTTCGA GCGTCTGCTG CATGTATGCC
ATAAAGGAGG CGATTGTCGC CAAGGAGCAC AGCAAGGAGC CCCTGGATGC GACGGTTTTC
TTCATGGACA TGCGCACGTA CGGAAAGGAT TTCGAGAAGT ATTACAACCG GGCGCAATCC
GAGTACGGCG TGAAGTTCGT CCGATCGAGG GTGCACACCA TCGATCGGGC GCCGGGGGAC
CGGCTGAGCA TATCGTATAC CACCGAAGCG GGGGAGCAAT CCGAGGAGCA GTTCGACATG
GTGGTTCTGT CGGTCGGCAT GGAGGTATCC GCCGAAGCGA CCGCCCTGGC GGGAAGACTC
GGCATTTCGC TCAACAGTTA TCGGTTCGCG GAAACCAGCT CCTTTGCGCC GGTGAGCACT
TCGCGTCCGG GGGTCTACGT TTGCGGCGTG CTCCAGGGAC CGAAGGACAT TCCGTTTGCG
GTGGCGGAAG CCAGCGCGGC GGCCGGAGCG GCGGCCGGGG ACCTCGCGGA TTCCAGGGGA
ACGAGGGTGA AGGTGAGGGA GCTCCCCCCC GAGCTCGATC TTGGCGATGA GAGTCCCCGC
ATCGGAGTCT TTGTCTGCAA CTGCGGCATC AACATCGGTT CCGTCGTCAA GGTCCCGGAG
GTGGTCGAGT ATGCCGCGAA GCTGCCTCAC GTCGTTTGGA CGGAGGAAAA CCTTTTCACG
TGTTCCCAGG ATACCCAGGA ACGCATCCGG CAGGCGATCA AAGAGCACCG GCTGAACCGT
GTGGTGGTCG CGGCCTGTTC GCCGCGCACC CACGAACCGC TCTTTCAGGA CACCTTGAAA
GGCTGCGGCC TCAACAAGTA CCTTTTTGAA ATGGCCAATA TCCGCGACCA GGATTCCTGG
GTGCACCAGA AAGAACCGGG GAATGCCACG GAAAAGGCCG TCGATTTGGT CCGCATGGCC
GTGGCCAGGG CCGCGCTCCT CAAGCCCCTC ATCGAGCGGC CTCTCGAAAT CAACCAGAAG
GCGCTCGTGA TCGGGGGAGG AATTTCCGGA TTGAACGCGG CTCTCAACCT TGCCCGGCAA
GGCTTCGAGG TGGCCCTCGT GGAAAAGGAA AAAGAACTCG GAGGCATCGC CCGCCGCCTC
CACCACACCA TCGAAGGTCT CGACGTGCAG TCCTACCTGG CGGAACTGGT CAGAGAGGTG
CGTGGGAACG GCAGGATCGA GGTCCTCTCC GACACGGTCG TAGCCGGATA CAAGGGATAC
AAGGGCAACT TCGTCACCGA GGTGCGGACG AACTCGGGAG AGGAGCGGCG CACGATCGAT
CACGGCGTCG CCATCGTGGC CACCGGTGCC GTTGAATACA AGCCGACGGA GTTTCTCCAC
GGGGAGCACC CGATGGTCAT GACCCAGCTC GACCTCGGGC GCCTGATCCA TGAGGACGGC
CGGGGAATCT CCAAGTGGCG GCGCGTCGTC ATGGTCCAGT GCGTGGGCTC GCGCAACGAG
CAGAACCCCA ACTGCAGCCG CATCTGTTGC CAGAACGCGG TAAAGAACGC CCTGACCCTG
AAGGAGCTGA ACCCGGACCT CGAGATTATC ATCCTTTACA GAGACATGAG GATGTACGGA
ATGCTCGAGG ATTACTACAC CAAGGCGAGG CAGGAAGGGA TCCTCTTCTG CCGGTATCAA
CAGGCCAATC CGCCCGCGGT GACATCGGAA AACGGCGCCC TGCGGGTTAC CTTCAGCGAT
CACGTGCTGA ACCGGAGCAT CCAGGCCGGG GTCGATGCCG TCGTGCTCAG CGCCGGGACC
GTGGCGGCCG ACAACGAGCG CCTGGCCACG TTGCTGAAGG TTCCGCGCAA TGCCGAGGGT
TTCTTCATCG AGGCCCACGC CAAGCTCCGC CCGGTGGACT TCTCCTCCGA GGGCATCTAC
CTGTGCGGAA TGGCCCACGG GCCGAAGCTC ATCAGCGAAT CCATCGCCCA GGCCATGGCG
GCGGCATCAC GCGCGGGAGC GTTTCTCTCC TCCAAGGACC TCACCATCGG AGGAGTGGTT
GCCCGGGTGG ACCCGAGCCT GTGCGCGGCC TGCCTGGTGT GTGTCAGAAG CTGCCCTTAC
GGCGTCCCGC AAATCAACAA GGACGACGTT TCGGAAATCA ACGAAGCTCT GTGCCAGGGC
TGCGGGATCT GCGCGTCCGA GTGCCCGGCA AAGGCGATTC GACTGGCCCA CTACGCAGAT
GATCAAATCA TGGTCAAGGT GGATGCCCTG TTGGAAGGAG TGCTTTGA
 
Protein sequence
METSNGSTFG SVMVVGGGVA GIQAALDLAN AGFYVYLVER ASAIGGAMSQ LDKTFPTNDC 
SMCILSPKLV ECGSHPSIRL LTTSELTALE GDVGRFRAKV LQHPRYVDLS KCISCGACAE
KCPAVVSDAY NAGLGKRKAI YKLYAQATPS GYAIDAANCR RIGRGKKCSV CAKFCPAGAV
DYTQQEQVLD LEVGAVILSA GFQAFDPAGL DTYLYNDHPN VVTSLEFERI LSASGPFMGH
LVRPSDHAEP RRIAWIQCVG SRNVNHCENG YCSSVCCMYA IKEAIVAKEH SKEPLDATVF
FMDMRTYGKD FEKYYNRAQS EYGVKFVRSR VHTIDRAPGD RLSISYTTEA GEQSEEQFDM
VVLSVGMEVS AEATALAGRL GISLNSYRFA ETSSFAPVST SRPGVYVCGV LQGPKDIPFA
VAEASAAAGA AAGDLADSRG TRVKVRELPP ELDLGDESPR IGVFVCNCGI NIGSVVKVPE
VVEYAAKLPH VVWTEENLFT CSQDTQERIR QAIKEHRLNR VVVAACSPRT HEPLFQDTLK
GCGLNKYLFE MANIRDQDSW VHQKEPGNAT EKAVDLVRMA VARAALLKPL IERPLEINQK
ALVIGGGISG LNAALNLARQ GFEVALVEKE KELGGIARRL HHTIEGLDVQ SYLAELVREV
RGNGRIEVLS DTVVAGYKGY KGNFVTEVRT NSGEERRTID HGVAIVATGA VEYKPTEFLH
GEHPMVMTQL DLGRLIHEDG RGISKWRRVV MVQCVGSRNE QNPNCSRICC QNAVKNALTL
KELNPDLEII ILYRDMRMYG MLEDYYTKAR QEGILFCRYQ QANPPAVTSE NGALRVTFSD
HVLNRSIQAG VDAVVLSAGT VAADNERLAT LLKVPRNAEG FFIEAHAKLR PVDFSSEGIY
LCGMAHGPKL ISESIAQAMA AASRAGAFLS SKDLTIGGVV ARVDPSLCAA CLVCVRSCPY
GVPQINKDDV SEINEALCQG CGICASECPA KAIRLAHYAD DQIMVKVDAL LEGVL