| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_3105 |
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| Symbol | |
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| ID | 4458550 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Syntrophobacter fumaroxidans MPOB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008554 |
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| Strand | - |
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| Start bp | 3815603 |
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| End bp | 3816772 |
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| Gene Length | 1170 bp |
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| Protein Length | 389 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 639703876 |
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| Product | extracellular ligand-binding receptor |
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| Protein accession | YP_847213 |
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| Protein GI | 116750526 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.64702 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGAAAA TGTTGTGGAT CATGGCACTG AGCTTGATCG TGCCGCTTTG CGTCACACCC
GCTTCGTGGA GCGCCGACAC CATCAAGGTC GGTTTCAACA TTCCCCTGAC GGGCGACATT
CCCAAGGTCG GGGAAAGCTC CAAGTTCGCC GCGGAAATCC TCAAAGGCGA GATCAACGCC
GCCGGAGGGC TGAAAGTCGG GGACAAGACC TACCAGCTGG AATTCATTTA CGAAGACAAT
GAATCCAAAG CCGAATCGGC CACCGCCACG GCCTTGAAGC TCATCACACA GGACGGCGTC
CTGGCGATCA TCGGCCCCCA GTCGAGCAAG CAGGCCATCC CGGCGGGTCA GGTATGCAAC
GACAACAAAA CTCCCATGAT CTCCCCCTGG TCGACCAACC CCAAAACCAC TGAAAATCGC
CCCTACGTAT TCCGGGCGTG TTTCCTCGAT CCGTTCCAGG GCCCGGTGGC CGCCAAGTTC
GTAACCGAGG AATTCAAGGC CAAGAAGGCG GCCGTGCTTT ACGACATCGC CAGCGACTAT
CCGAAGGGCC TTGCGGAGTT CTTCAAGGAC GCCTTCGAAA AGATCCACGG ACCGGGCTCG
GTGGTGGCGT TCGAGACATT CACCACGAAG GACAAGGATT TCAGCGCCCA GCTCACCAAA
ATCGTCGCTT CCGGGGCCGA CGTTTTGTTC ACTCCGCAAT ACTACGATGA AGTCCCCCTG
ATCGTGAAAC AGGCCCAGGA ACTCGGGTGG AAGAAACCCA TCATGGGCAG CGACAGCTGG
GGATCGGCCG AGCTGATGAA GCTCTGCGGC GATGCCTGCA AGGGCTACTG CTTCAGCACT
CATTACGCTG CCGCCGGAGC CAAGGGAGCC ACCAAGGAAT TCATCGACAA GTACAACACG
AAGTACGGCT ACGTGCCCGA CGACGTTGCC GCTCTCACCT GGGATGCCAT CAACCTGCTC
TTCACCGCCG TGAAGAACAC CGGCGGGCTG AGCGGCAATC TCGACAAGGA CCGCGACGCC
ATCAAGGATA AGCTCACGCA GGTCAAGGAC TTCGAGGGCA TCACCGGAAA GATGACCTTC
GCGCCGGGCG GCAATCCGAC CAAGTGCGCG GTGGTCGTCA AGATCAGCGA CAAGGGTGAA
TTCGAGTTCT TCAAGTCAGC CTGTCCCTGA
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| Protein sequence | MKKMLWIMAL SLIVPLCVTP ASWSADTIKV GFNIPLTGDI PKVGESSKFA AEILKGEINA
AGGLKVGDKT YQLEFIYEDN ESKAESATAT ALKLITQDGV LAIIGPQSSK QAIPAGQVCN
DNKTPMISPW STNPKTTENR PYVFRACFLD PFQGPVAAKF VTEEFKAKKA AVLYDIASDY
PKGLAEFFKD AFEKIHGPGS VVAFETFTTK DKDFSAQLTK IVASGADVLF TPQYYDEVPL
IVKQAQELGW KKPIMGSDSW GSAELMKLCG DACKGYCFST HYAAAGAKGA TKEFIDKYNT
KYGYVPDDVA ALTWDAINLL FTAVKNTGGL SGNLDKDRDA IKDKLTQVKD FEGITGKMTF
APGGNPTKCA VVVKISDKGE FEFFKSACP
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