| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_3054 |
|---|
| Symbol | |
|---|
| ID | 4458604 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Syntrophobacter fumaroxidans MPOB |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008554 |
|---|
| Strand | - |
|---|
| Start bp | 3760776 |
|---|
| End bp | 3761495 |
|---|
| Gene Length | 720 bp |
|---|
| Protein Length | 239 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 639703826 |
|---|
| Product | MgtC/SapB transporter |
|---|
| Protein accession | YP_847163 |
|---|
| Protein GI | 116750476 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG1285] Uncharacterized membrane protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.362097 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGACACGT TTGCATTCGA CTTCATCCCG GCCTTGGAAA TGATCGGCAA ATTGACCCTG
GCCGCTCTGC TCGGCGCCGC CGTGGGTTTC GAGCGGGAAT CCCATGGACA GTCCGCGGGT
CTAAGAACAA ACCTGATGAT TTGCGTGGGA TCGTGCCTGA TGATGATGCT TTCCCTGCAC
ATGGAGGAAC TGTTCTGGAG GCTCGATGCA AATTCCATCG TTCGGATCGA CCCCGGCAGA
ATCGCGTCCT ATGCGATTTC AGGCATGGGT TTTCTGGGCG CCGGGGCCAT CATCAAAGGG
CGCGGCACAG TGCGCGGCCT GACCACCGCG GCAGGGCTCT GGCTCAACAC GGGCATAGGC
CTGGCGATCG GCGCCGGCTA CCTGCTGCCC GCGATCTATA CGACTTTCAT CAGTTTGTTC
ATCCTCTATA ACCTTCGGTT CCTCAAAGTT TTCGTCGCCC ATGACGTCTA CACCGTGCTG
ACCATTTCGT GTATCAGCTC CGAAAAACCA TTGACGCGCA TCCGCAAGAT TCTCGGCGAA
CACCCGGGGA TCGACATCCG TTTCATCAAC TACAGCTCCC ATCTCTCCAC CGACTCCGTG
ACCTACCGGA TTCGCCTGCG CAGTAAGGAA CATCATCCCT GGGGAAAGAT CATCGGTCGT
CTCACCGCCG ATATTCCCGG GCTGAAGGAA ATCGCCTGGG AAGAGAGCGA CGTTCCCTGA
|
|---|
| Protein sequence | MDTFAFDFIP ALEMIGKLTL AALLGAAVGF ERESHGQSAG LRTNLMICVG SCLMMMLSLH
MEELFWRLDA NSIVRIDPGR IASYAISGMG FLGAGAIIKG RGTVRGLTTA AGLWLNTGIG
LAIGAGYLLP AIYTTFISLF ILYNLRFLKV FVAHDVYTVL TISCISSEKP LTRIRKILGE
HPGIDIRFIN YSSHLSTDSV TYRIRLRSKE HHPWGKIIGR LTADIPGLKE IAWEESDVP
|
|---|
| |