Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfum_2956 |
Symbol | |
ID | 4458716 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Syntrophobacter fumaroxidans MPOB |
Kingdom | Bacteria |
Replicon accession | NC_008554 |
Strand | - |
Start bp | 3649263 |
End bp | 3651356 |
Gene Length | 2094 bp |
Protein Length | 697 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 639703728 |
Product | glycogen debranching enzyme GlgX |
Protein accession | YP_847065 |
Protein GI | 116750378 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1523] Type II secretory pathway, pullulanase PulA and related glycosidases |
TIGRFAM ID | [TIGR02100] glycogen debranching enzyme GlgX |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.490165 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATGCCAA TACAATACGC GACCAGGCCG GGATCGAGGT ATCCCGGTGG AGCCACGGTC GATTCGGGAG GGGTCAATTT CGCGGTCTTC AGTCGGAACG CGACCGCGAT GGAACTGCTG CTTTACGAAT CCGCGGACTG CCCGGAGCCT TTCCAGGTGA TTCGGCTCGA CCCCGAAACC AACAGGACCT TTTTTTCCTG GCACGTCTAT GTGGAAGGAC TGACCGCCGG CGCGCACTAC ACCTGGCGAG TGGACGGTCC CGACGATACG AAACGATCCG GAAGACGCTT CGACCGGACC CGGGAACTGC TGGACCCATG GGCGGCGGCG GTCACGGATC GGCTCTGGAA CCGCAACCGG GCCTGTCTTA ACGGCGGCGG CGCTCCATCC ATGCGCGCTG CGGTCGTGTC CGGCGGCTAC GACTGGGAAG GAGACCGACC GCTGGAGTCC CCATCCGAGT CCACCATCAT CTATGAATTG CACGTCGGGG GCTTCACGCG GCATCCATCA TCCAAAGTCG CCCATCCCGG CACCTTTCGG GGCCTGATCG AAAAAATCCC CTATTTGAAG GATCTGGGCA TCACTCACGT GGAATTGATG CCGGTCATGG CCTTTGACGA ACAGGATCTT CCCGAGTCGG TCGCCGCCCT GGGACTGAAA AACTTCTGGG GCTACAGCAC GCACAGCTTT TACGGCCCCC ACCCGGGGTA CTGCGTCACC CCCGAGGCGG GGACTCACGC TCATGAATTC CGCGACATGG TCAAGGCGCT TCACCGCGCG GGCATCGGTG TGATCCTCGA CGTGGTGTTC AATCACACCG CCGAAGGCGG GGCCCGCGGG CCCGTCATCA ATTTCAAGGG CTTCGTCAAC GAGCTGTTCT ATCACCTCGA ACCCAACGAC CGGAGCGTCT ACCGCGACTA TACGGGCTGC GGCAACACTG TCAACTGCAA CCACCCCCTG CCGGCAAGAT TCATCATTCG CTGTCTTGAG GGCTGGGTCC GGGAAATGCA CGTGGACGGC TTCCGGTTCG ACCTCGCCAG CGTCATGGCC CGCGGTGAAG ACGGCAACCC GATGCGGCAC CCGCCGGTGC TTTGGAATAT CGAATTCTCG GACGTTCTCC TGAACACCCG AATCATTGCC GAAGCGTGGG ACGCCGCCGG CCTCTACCAG GTGGGAACAT TTCCCGGCCT GCGCTGGGCG GAATGGAACG GAAGATACCG GGACGTCATG CGCCGTTTCG TCCGCGGCGA ACCCGGGCTT GCGGGACAGG CGGCAACCAA TCTGAGCGGC AGCAGCGATC TCTACCAGCC GCTGGACCGT CTTCCGACGA ACAGCATCAA TTTCATCACG TGCCACGACG GCTTCACATT GAACGACCTT GTCAGTTTCA ACGACAAACA CAATGACGCC AACGGCGAAA ACAACCGGGA CGGGAGCAAC GACAACCTGA GCTGGAACTG CGGGGTGGAG GGAGACACCG ACGACCCGCA AGTCCTGGCG CTGCGGCGCC GGCAGGTGAA GAATTACATG GCGATCCTGC TGCTGAGCCA GGGAGTTCCC ATGATCCTGG CGGGCGATGA GGTGCTGAGG ACCCAGCGCG GGAACAACAA CTGCTACTGC CAGGACAACG AGTTGGGTTG GCTCGATTGG ACTCTCATGG AGAAAAACCG GGACGTGCTC CGGTTTGTCC GGGAAATGAT CGCATTCCGA AAGCGTCATC CATGCCTCAT GCGAACCCGC TTCCTGACGG GCCGAAAGCA GCCGGGAAGG TCCCTCCCCG ACGTGAGCTG GCACGGCATC AGGCTCAACG AGCCGCCATG GAGCGATCCG GATGCCCGAA CGCTTGCCTG CACCCTGTCC GCCACGGAAG ATCATGAAGA AGACTTGCAC GTGATCCTCA ATATGGCTTC GGACCCCGTT TCGCTTGACC TGCCGGAGAT CGCGGGTCTG AGCTGGCACC GTGCGGTGGA TACGTGGCTG CCAAGCCCGG AAGATATTCT CAGGGTGCCC GATCAACTGC CTGTCCGGGA CCATCGCATT CTGGCCCACG CACGCTGCGT GATGGTATTC GAAGGAAGAC CGGGGAGAAG TTGA
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Protein sequence | MMPIQYATRP GSRYPGGATV DSGGVNFAVF SRNATAMELL LYESADCPEP FQVIRLDPET NRTFFSWHVY VEGLTAGAHY TWRVDGPDDT KRSGRRFDRT RELLDPWAAA VTDRLWNRNR ACLNGGGAPS MRAAVVSGGY DWEGDRPLES PSESTIIYEL HVGGFTRHPS SKVAHPGTFR GLIEKIPYLK DLGITHVELM PVMAFDEQDL PESVAALGLK NFWGYSTHSF YGPHPGYCVT PEAGTHAHEF RDMVKALHRA GIGVILDVVF NHTAEGGARG PVINFKGFVN ELFYHLEPND RSVYRDYTGC GNTVNCNHPL PARFIIRCLE GWVREMHVDG FRFDLASVMA RGEDGNPMRH PPVLWNIEFS DVLLNTRIIA EAWDAAGLYQ VGTFPGLRWA EWNGRYRDVM RRFVRGEPGL AGQAATNLSG SSDLYQPLDR LPTNSINFIT CHDGFTLNDL VSFNDKHNDA NGENNRDGSN DNLSWNCGVE GDTDDPQVLA LRRRQVKNYM AILLLSQGVP MILAGDEVLR TQRGNNNCYC QDNELGWLDW TLMEKNRDVL RFVREMIAFR KRHPCLMRTR FLTGRKQPGR SLPDVSWHGI RLNEPPWSDP DARTLACTLS ATEDHEEDLH VILNMASDPV SLDLPEIAGL SWHRAVDTWL PSPEDILRVP DQLPVRDHRI LAHARCVMVF EGRPGRS
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