Gene Sfum_2881 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_2881 
Symbol 
ID4458778 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp3559255 
End bp3559602 
Gene Length348 bp 
Protein Length115 aa 
Translation table11 
GC content60% 
IMG OID639703655 
ProductHNH endonuclease 
Protein accessionYP_846993 
Protein GI116750306 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.487146 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACGGAA AGGATGAAGA AGCCCGGCGC GATCGTGCGC TTCGAGAAAA ATCCTATCGG 
GAACGGGCTC TGAAGATCCT CCCCTGGATT TGCGCCCGGT GCGGCCGCGA ATTCTCGGGG
AAAAGGCTCC GGGAGCTCAC GGTCCACCAC AAGGACCACA ATCATCACAA CAATCCTCCG
GACGGCAGCA ACTGGGAGCT GTTGTGCCTG TACTGCCACG ACAACGAACA CTCCCGCGGC
CAGGACGGAG AATGGTATGA CGAGCCGATC GCGGGCGAAG AACGCGAACC TGCGTCCACG
TTCAAGCCGT TCGCCGGACT CGAGGCACTG CTGAAACGGA AGAAATGA
 
Protein sequence
MDGKDEEARR DRALREKSYR ERALKILPWI CARCGREFSG KRLRELTVHH KDHNHHNNPP 
DGSNWELLCL YCHDNEHSRG QDGEWYDEPI AGEEREPAST FKPFAGLEAL LKRKK