Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfum_2827 |
Symbol | |
ID | 4458858 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Syntrophobacter fumaroxidans MPOB |
Kingdom | Bacteria |
Replicon accession | NC_008554 |
Strand | + |
Start bp | 3485268 |
End bp | 3486422 |
Gene Length | 1155 bp |
Protein Length | 384 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 639703601 |
Product | CRISPR-associated Cse4 family protein |
Protein accession | YP_846940 |
Protein GI | 116750253 |
COG category | |
COG ID | |
TIGRFAM ID | [TIGR01869] CRISPR system CASCADE complex protein CasC/Cse4 |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTTGTCG ATATTCACAT CATTCAAAAT TTTGCACCCT CCAATCTGAA CCGTGACGAC ACAAACTCTC CCAAGGATTG CGAATTCGGC GGCTATCGCC GCGCCCGCAT TTCCAGCCAG TGCATCAAGC GAGTGGTGCG AAGCCACCGT TCGTTTTCGC AAGCTGTCGT CCATGCCGGA GGAGATACCG GCGTCAGGAC CAAGCGGATC AAATCCAGGC TCATGGATCT GTTTGCCAAA AAATACGGAA AGCCCGAGAT AGTGGAGACA GAAAAGGTTG CAGAGACAGT GATTGAGCTT CTCGGGCTAA AGCTGAAAGA TGAAGAAAAG ACCGAATATC TCCTCTACCT GGGAGAGAAC GAGGCTGCGC AACTTGCCCG GCTTGCCGTA GATTCGTGGG ATGCCCTCCT TGCCATAGAG CCCGAGCAGG ACAAGAAGAA GAAAAAGGGC ACCGGCCAGG AGTCTCTCAA AGAGTTTCAG GAAGAACTGA AAGGCATCGT GGGAAAAAGG AGGAAGGAAG CTCGGAGCTA TGCCGCCGAC ATTGCTCTCT TTGGCCGAAT GATCGCCGAC AACAAGAACA TGAATGTCGA TGCCGCATGT CAGGTGGCAC ACGCGGTCTC CACGAACAAA GTTGAAATGG AAATGGACTA CTTCACGGCG GTGGACGACC TTTTGCCTGG AGAGGAGACG GGATCGGACA TGATCGGGGT TGTCGAGTTC AACAGCTCCT GTTTCTATCG GTACTCGAAC GTCAACGTGT CGAAGCTCGC GGAAAACCTC GGCTTCAATA ACGACCTTAC AACAGCCGCT CTTCTCGGAT ATGTGGAAGC CTCCGTCAAA TCGGTGCCGA CCGGAAAGCA GAACAGCATG GCCGCACAAA ACCCAGCCGG GTATGCGCGG GTTATCGTGC GACGGGACGG GTTCCCGTGG TCCCTTGCCA ATGCGTTCCA AAAGCCGGTT CGACCATCGC TGGATAAGTC TCTTGAGGAG GCTTCCATTG ACGCGCTGGA AAGATATTTC GAGCGACTCA AGGCTGTTTA TGGCACCGAG GGAATTGTTT GTGACGCTTC GTTCAACCTG CACCGTGACG ACGGCGGAAG CCTCCGGAAA ATGCTTGATG CGCTCAAGGC TTGCGTTGCC GGGGAGGGCT CATGA
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Protein sequence | MFVDIHIIQN FAPSNLNRDD TNSPKDCEFG GYRRARISSQ CIKRVVRSHR SFSQAVVHAG GDTGVRTKRI KSRLMDLFAK KYGKPEIVET EKVAETVIEL LGLKLKDEEK TEYLLYLGEN EAAQLARLAV DSWDALLAIE PEQDKKKKKG TGQESLKEFQ EELKGIVGKR RKEARSYAAD IALFGRMIAD NKNMNVDAAC QVAHAVSTNK VEMEMDYFTA VDDLLPGEET GSDMIGVVEF NSSCFYRYSN VNVSKLAENL GFNNDLTTAA LLGYVEASVK SVPTGKQNSM AAQNPAGYAR VIVRRDGFPW SLANAFQKPV RPSLDKSLEE ASIDALERYF ERLKAVYGTE GIVCDASFNL HRDDGGSLRK MLDALKACVA GEGS
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