Gene Sfum_2815 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_2815 
Symbol 
ID4458846 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp3470179 
End bp3470703 
Gene Length525 bp 
Protein Length174 aa 
Translation table11 
GC content56% 
IMG OID639703589 
Producthypothetical protein 
Protein accessionYP_846928 
Protein GI116750241 
COG category[C] Energy production and conversion 
COG ID[COG4314] Predicted lipoprotein involved in nitrous oxide reduction 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGGTGA AGATGCTTAT CGGATTATTG GCGTTATTGG TTCTTTTGTC CGGAACCCCC 
GTCCCGGCGC AAATGGATGA CGACATCGCA AAACACGCGA GCTGCAAATA CTGCGGGATG
GACCGGCAGA AGTTCGCGCA CAGCAGGATG CTCGTCGAAT ACGAAGACGG CACCGTCACC
GGGACGTGCA GTATCCATTG CACGGCCATC GACCTGGCCG TGAACATCGA CAAGACACCG
AAACTCATCC GGGTGGGAGA CTACGGCACG AAGAAGCTTA TCGATGCTGA GAGCGCCGCG
TGGGTGATTG GCGGAGACAA GCCCGGCGTC ATGACCAAAC AGGCCAAGTG GGCGTTCGCG
AACAAAGAGG ATGCTGCGAA ATTCGCCAAG GAGAGCGGAG GAACCGAGGC ATCCTTCGAT
ATGGCGATGG AAGCGTCCTT CCGGGATATG TACACGGACA CGAAAATGAT CCGTGAGAAG
CGAAAGATGA TGAAGCAGAA GATGCAGCCC GAACAAAAGC CCTGA
 
Protein sequence
MKVKMLIGLL ALLVLLSGTP VPAQMDDDIA KHASCKYCGM DRQKFAHSRM LVEYEDGTVT 
GTCSIHCTAI DLAVNIDKTP KLIRVGDYGT KKLIDAESAA WVIGGDKPGV MTKQAKWAFA
NKEDAAKFAK ESGGTEASFD MAMEASFRDM YTDTKMIREK RKMMKQKMQP EQKP