Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfum_2811 |
Symbol | |
ID | 4458876 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Syntrophobacter fumaroxidans MPOB |
Kingdom | Bacteria |
Replicon accession | NC_008554 |
Strand | - |
Start bp | 3466412 |
End bp | 3467746 |
Gene Length | 1335 bp |
Protein Length | 444 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 639703585 |
Product | RND family efflux transporter MFP subunit |
Protein accession | YP_846924 |
Protein GI | 116750237 |
COG category | [V] Defense mechanisms |
COG ID | [COG1566] Multidrug resistance efflux pump |
TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGACGTT ACGTCAAGCG GGGTGTTCTC GGATTGATCG TACTGGCCGT CGTGGGTTAC CTGGCATCAT GGCTCGCGCA GGGCAACGAC GCACAGTCGG TCCAGTACCG AACGGTCGCC TTGAAGCGGG GCGACCTGGT GGCGACCATC AGCGCGACGG GCACGGTGGA ACCGGAAGAA GTGGTGAACG TGGGAGCGCA GGTGGCGGGG AGAATCCTGG AATTCGGACA GGACGGTTCA GGCAAGACCA TCGACTACGG CTCGATCGTC GAGCAGGGGA TGGTTCTGGC TCGAATCGAC AGCTCCCTAT ACGCCGCCGA CGTCGCCACG ACCAAGGCAC AGGTCGAGCA GTCCAAGGCG GCGGTGATCC GGGCCGAGGC CGACCTCGTG CAGATGCAGG CCAAGCTCTT CCAGGCGGAA CGCGACTGGA ACCGGGCGAA GAAACTGGGG CCTTCCGAGG CGTTGTCGCA GAGTGATTTC GATGCCGCCC AGTCGGCCTA TGAGGTTGCC AAGGCCAATG TGGGAGTGGC CAAGGCTTCA ATCCTGCAGG CGCAGAATGC AGTTTCCCAG GCCCAGGCCG TCATGACGAA AGCGCAGCAG AACCTGGACT ACTGTACGAT CCGGTCTCCC GTCCGGGGAG TGATCATCGA CCGCCGGGTC AACATCGGCC AGACGGTCGT TTCGAGCCTC AATGCCCCCA GCCTGTTCCT GATCGCAAAG GATCTCAAGC GATTGCAGGT CTGGGTTGCG GTGAACGAGG CGGACATCGG GAACATCGTT CCCGGCCAGG CGGTCGTCTT CACGGTGGAC GCCTACCCCG GCCAGGTGTT TCAGGGTGAG GTGGGCAAGG TGCGGTTGAA CGCCGCAATG ACCCAGAACG TGGTCACTTA CACGGTGGAG GTCCTCACGG ACAATTCCGA CGGCCGACTG CTGCCGTACC TGACCGCAAA CGTGAAATTC ATGCTGAGCC GGCGCGACAA CGTGCTGATG GTGCCCAATG CGGCCCTGAG GTGGAGCAAG GAGCCCGATC AGGCGGCTCA AGCGGATCGG CCGGGCCGGC AGGGACAGGA CCGGCAGGGA AGCGGGGCCG GCGGGGCCGC GGCGCAGACC GAAAAGGACC GGGAAGAGGA GCGGCGCGGC ACGATCTGGG TCCTGGCGAA CGGATCGGTG AAGCCGATCC CGGTGCGCGT GGGTGTGACC GACGGGACAA GCACGGAAGT CGAAGGCAAC GGACTCAAGG AAGGAATGCA GGTTGTGACG GGAGAGCAAC CCAGGGAGAC GCCGGGCGGC TCGACGCCCG CCAGCCCGTT TACGCCGAAG CTGTTCCGAA GATAA
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Protein sequence | MRRYVKRGVL GLIVLAVVGY LASWLAQGND AQSVQYRTVA LKRGDLVATI SATGTVEPEE VVNVGAQVAG RILEFGQDGS GKTIDYGSIV EQGMVLARID SSLYAADVAT TKAQVEQSKA AVIRAEADLV QMQAKLFQAE RDWNRAKKLG PSEALSQSDF DAAQSAYEVA KANVGVAKAS ILQAQNAVSQ AQAVMTKAQQ NLDYCTIRSP VRGVIIDRRV NIGQTVVSSL NAPSLFLIAK DLKRLQVWVA VNEADIGNIV PGQAVVFTVD AYPGQVFQGE VGKVRLNAAM TQNVVTYTVE VLTDNSDGRL LPYLTANVKF MLSRRDNVLM VPNAALRWSK EPDQAAQADR PGRQGQDRQG SGAGGAAAQT EKDREEERRG TIWVLANGSV KPIPVRVGVT DGTSTEVEGN GLKEGMQVVT GEQPRETPGG STPASPFTPK LFRR
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