Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfum_2809 |
Symbol | |
ID | 4458874 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Syntrophobacter fumaroxidans MPOB |
Kingdom | Bacteria |
Replicon accession | NC_008554 |
Strand | - |
Start bp | 3462347 |
End bp | 3463840 |
Gene Length | 1494 bp |
Protein Length | 497 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 639703583 |
Product | RND efflux system outer membrane lipoprotein |
Protein accession | YP_846922 |
Protein GI | 116750235 |
COG category | [M] Cell wall/membrane/envelope biogenesis [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG1538] Outer membrane protein |
TIGRFAM ID | [TIGR01845] efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCATCTC TTGCGAATCG CATTCGGAGC CGGTCGGTGA TCACGCGCTT GGCACCGCTG CTGTTGCCGG CGGTTTGGTT CCTGCTTGCG GGCTGCATGG TGGGGCCCGA TTTTCACCGG CCCAAAAGCG ATCCGCCCGG CGCGTACACG GGAGTGACCG CCGGCGCGAC GCGTGAGCCG AGCGTCACGA CCGGGGAGCC GGCGCGGCTG ATCGACTGGT GGAAAGCGTT CGACGATCCG GTGCTCACCT CGCTCATCGA GCGGGCCATC ACCGCGAACC TCGATGTTCG CCAGGCTCAG GCCCGCATCC GGCAGGCCAG GGCCACACGC GGCGTGGCGG CTTCCGGACT GTTTCCGGAA ATCGATGCAG GCGCCTCCTA CAATTACAGC CGCGGCAGTC CCGGAACCGT GTCTTCCTCC GGCGGAGGGA CCACCGCCGC AGGTGCGGCC GCTACCCCGC GCGAATTGTT CCAGGTGGGG TTCGACGCCT CCTGGGAACT CGATTTCTTC GGCGGCACTC GACGAAATAT CGAGGCATCC GACGCCGACC TCAAGGCCGC CGTGGAGGAC CGCCGGGATG TGCTGGTGTC GATGGCGGCC GAGGTCGGGA CCGAATACGT TACCCTTCGC GGGCTTCAGG CCCAGTTGCT CATCGCCCGG AAAAACCTCG CGTCGCAGAA GCACACCGCC GGCATCACCA GGAAGCGCTG GCAGGCGGGT TTCGTGAGCG CCCTGGACGT AGCCAACGCG GATGCGCAGG CGTCGACGAC GGAAGCGCAG ATCCCGATCC TCGAATCCTC GATACGGGCG ACGATCTACA GCCTGGGCCT GCTGCTGGCG CAACCGCCCG CCGCCCTTCT CGACGAGCTT TCGGACGACG GGCCGATTCC GCCCATTCCG CCGGAGGTGC CCGTCGGGTT GCCCTCGGAT CTCATCCGCA GGCGCCCCGA CATCCGAAGA ACCGAAGCCC AGGTCCATGC CGCCACGGCC CGCATCGGAG TCGCCACCGC CGACCTGTTC CCGAAATTCG CCCTCACCGG TTCGATGGGG CTCATGAGCG CGGACCTCAA CACCCTGGCG AACCTGAGCA ACCGTTTCTG GTCGCTCGGT CCCACCGTGT CGTGGCCGAT TTTCACCGCC GGCCGGATCC AGTGCAATAT CGAAGTGCAA AACGCCGTGC AGGAACAAAC CTTGCTCGCC TACGACAAGA CCATCCTCAC CGCGCTCAAG GACGTGGAGA CCGCCCTGAC CGCCTACGCC AAGGAACAGG AGCACAACCG GTCCCTGACG GAGGCCGTGG CCCACAACCG AAAGGCCGTG GACTTGTCCA TGCGGCTGTA TCTCGTGGGA AAAATCGACT TCCTCAACGT TCTCAACGCC CAGCGGTCCC TCTACCTGAC CGAGGAGGGA CTGGCGCTGA GCAACCGTAC GCTGACCACC AACCTGATCG CGCTCTACAA GGCCCTTGGC GGCGGATGGG AGCGTGAATC GTAG
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Protein sequence | MPSLANRIRS RSVITRLAPL LLPAVWFLLA GCMVGPDFHR PKSDPPGAYT GVTAGATREP SVTTGEPARL IDWWKAFDDP VLTSLIERAI TANLDVRQAQ ARIRQARATR GVAASGLFPE IDAGASYNYS RGSPGTVSSS GGGTTAAGAA ATPRELFQVG FDASWELDFF GGTRRNIEAS DADLKAAVED RRDVLVSMAA EVGTEYVTLR GLQAQLLIAR KNLASQKHTA GITRKRWQAG FVSALDVANA DAQASTTEAQ IPILESSIRA TIYSLGLLLA QPPAALLDEL SDDGPIPPIP PEVPVGLPSD LIRRRPDIRR TEAQVHAATA RIGVATADLF PKFALTGSMG LMSADLNTLA NLSNRFWSLG PTVSWPIFTA GRIQCNIEVQ NAVQEQTLLA YDKTILTALK DVETALTAYA KEQEHNRSLT EAVAHNRKAV DLSMRLYLVG KIDFLNVLNA QRSLYLTEEG LALSNRTLTT NLIALYKALG GGWERES
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