Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfum_2791 |
Symbol | |
ID | 4458887 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Syntrophobacter fumaroxidans MPOB |
Kingdom | Bacteria |
Replicon accession | NC_008554 |
Strand | + |
Start bp | 3441173 |
End bp | 3441778 |
Gene Length | 606 bp |
Protein Length | 201 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 639703564 |
Product | recombination protein RecR |
Protein accession | YP_846904 |
Protein GI | 116750217 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0353] Recombinational DNA repair protein (RecF pathway) |
TIGRFAM ID | [TIGR00615] recombination protein RecR |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.0094882 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTTTCGA GCGGCTACCC CCCCATTATG AACGACCTCA TCAGGAGGCT GAGCAAGCTG CCGGGATTGG GAGAAAAGAG CGCCACCCGG ATCGCCATGC ATCTGCTCAA AATGTCGAGG ACCGATGCCG AAAGCCTGGC GGACGCGATC CGGGAGCTGA GAAGTCGGAT CCGGACGTGT TCCCGGTGTT TTCACTTCAC GGATGCCGAG GAGTGTTCCA TTTGTGCGGA TCCTGCCCGG GACACCGGGG AGATCTGCGT GGTGGAAACC ACCGCGGACC TGCTGGCGAT CGAACAGTCC GGGGCATACC GGGGACGCTA CCATGTCCTG CAGGGCGTGC TTGCGCCGCT GGACGCGGTG GGGCCCGACG ACCTGCGTAT CCGGGAGCTG CTCGAGCGCA TCGATCGGGA GGGTGCGCGG GAAGTGATCA TCGCCACGAA CCCTAGCAGT GAAGGGGAAG CGACCGCGCA TTACCTGCTG AAACTCCTGA AGGATCGCAA CGTGCGGGTA TCCCGGATTG CCTACGGCAT TCCCATGGGG GGCGACCTCA AGTACACCGA CCGGTTCACC CTGGAACGGG CTCTGAAGGG GCGGCAGGCG TTCTGA
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Protein sequence | MVSSGYPPIM NDLIRRLSKL PGLGEKSATR IAMHLLKMSR TDAESLADAI RELRSRIRTC SRCFHFTDAE ECSICADPAR DTGEICVVET TADLLAIEQS GAYRGRYHVL QGVLAPLDAV GPDDLRIREL LERIDREGAR EVIIATNPSS EGEATAHYLL KLLKDRNVRV SRIAYGIPMG GDLKYTDRFT LERALKGRQA F
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