| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_2772 |
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| Symbol | |
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| ID | 4458897 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Syntrophobacter fumaroxidans MPOB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008554 |
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| Strand | - |
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| Start bp | 3417546 |
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| End bp | 3419096 |
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| Gene Length | 1551 bp |
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| Protein Length | 516 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 639703543 |
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| Product | NifA subfamily transcriptional regulator |
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| Protein accession | YP_846885 |
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| Protein GI | 116750198 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG3604] Transcriptional regulator containing GAF, AAA-type ATPase, and DNA binding domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.229167 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCCAGA CCATCACTCC ATTCAATTTC TACAGGACCG TATCCGAGGA GCTCGACCCT
GAGCGGTTGC AGCGCAAGTT CCTTTCGGCC CTGCTCGATC TTCAGAATGT GGAGAGAGGT
TCCATCTGGG TCCGGCGCGG CGACGGATAC CAGTGCGTCG AAGCCGTGGG AAGCCAGAGT
GAAAGCATCA AGGGAATCGC GATCAGCGCC AGGCGACCGA GCATTGTGGG CTGGGTCATC
AAACACGGCA GCATGACCGT CGCCGAACCC GGCAAGGATG ACCGGCACTT CAAGGAGGTT
GAAGACAATA TCGCCGTGAA GAGCAGGCTC ATTCTGTGCT TTCCCCTCTT TCTCAAGAGC
GGAGAAGTTT ACGGCGCGGT GCAGTTGATC GACACCAGCG CTGGGGGCAA TCGCCTCAAT
TTGAATCAGG ATTACCTGGA GCTGCTCCAG CACCTGGTCG ATATCGGCGC CATGGCCCTG
AGCAATTCCC TCGTGTATTC GGACCAGGTG AGGGAAAACG AGAAGCTCAA ACAGACGCTT
GAAGCGCTTC GCAGCCAGGA GATCGCCCTG GGCCGGAGCC CGGCATTCAT CAAGGTGATG
AAACTGGCGG AGGATTATGC CCGGACGGAT TTCCCGGTGC TGATCACCGG AGAGAGCGGG
ACCGGCAAGG AACTCATCGC GCGGGAGATC CACCGGCTCA GTCGCCGCCA GGGCAATCCT
TTCCTGGTGC AAAACTGCAG CGCCATACCC GATACCCTCC TGGAAAGCGA ACTGTTCGGG
TACGAAAAGG GCGCCTTCAC CGGCGCCGTC AAGAGCAAGA CCGGCATTTT CGAGGCGGCC
GACGGGGGCA CCATATTTCT GGACGAAATC GGCGATATGC CTCTGGCGCT CCAGGCGAGG
ATACTGAGGG TGGTTCAGTA CAATGAGATC AAACCCCTGG GGGAAAACCG CCCCCGGAGT
GTGAACGTGA GGATCATTTC CGCGACGAAC AAAGACCTGA ATGGCGCCAT TGCCGGGGGG
ACGTTCAGGG AAGATCTCTT CTACCGGCTG AACGTGCTGC CGATCCACAT CCCGCCGTTG
CGGGAAAGAC GTGAGGACAT TCCCCTGTTG CTCGATCATT TCCTCGCCAG GGAGGCGCTG
AGGCTGGGAG TCCCGGCCAG GAGACTCTCT CCCGGGGCAC TTGAGTATGT CTGCGGTTAC
CCCTGGCAGG GAAACATCCG GGAGCTCGAA AACTTCGTGA GACATATCAT CGTGGTATCG
ACCGGCGAAA CCATCAGCCG GGAGGAACTG GCTCTGCACT TCCCGTCCGT TGCTCCCTCT
TCCGTCGAAT CCTCCCGGCC CGCTCAGTCC GTCGCCCCGG TGAGCACAGG CAAGGGTTCT
CCACCCGCCT CCTTTTCCTT CGAGGGTTAC AGCTGGGAAG AGCTTGAAAG GGCCTACATC
CTGTACCTGC TCGAAAAGAA CAGGTGGCAC ATCACCCGAG CCGCGCGGGA AGCGGGGGTT
AACCGGTCCA CCTTCGATTC GAGGATGAAA AGGCTGTCCA TTCGCAAATA G
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| Protein sequence | MSQTITPFNF YRTVSEELDP ERLQRKFLSA LLDLQNVERG SIWVRRGDGY QCVEAVGSQS
ESIKGIAISA RRPSIVGWVI KHGSMTVAEP GKDDRHFKEV EDNIAVKSRL ILCFPLFLKS
GEVYGAVQLI DTSAGGNRLN LNQDYLELLQ HLVDIGAMAL SNSLVYSDQV RENEKLKQTL
EALRSQEIAL GRSPAFIKVM KLAEDYARTD FPVLITGESG TGKELIAREI HRLSRRQGNP
FLVQNCSAIP DTLLESELFG YEKGAFTGAV KSKTGIFEAA DGGTIFLDEI GDMPLALQAR
ILRVVQYNEI KPLGENRPRS VNVRIISATN KDLNGAIAGG TFREDLFYRL NVLPIHIPPL
RERREDIPLL LDHFLAREAL RLGVPARRLS PGALEYVCGY PWQGNIRELE NFVRHIIVVS
TGETISREEL ALHFPSVAPS SVESSRPAQS VAPVSTGKGS PPASFSFEGY SWEELERAYI
LYLLEKNRWH ITRAAREAGV NRSTFDSRMK RLSIRK
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