Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfum_2748 |
Symbol | |
ID | 4458942 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Syntrophobacter fumaroxidans MPOB |
Kingdom | Bacteria |
Replicon accession | NC_008554 |
Strand | + |
Start bp | 3393194 |
End bp | 3394252 |
Gene Length | 1059 bp |
Protein Length | 352 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 639703519 |
Product | ADP-L-glycero-D-manno-heptose-6-epimerase |
Protein accession | YP_846861 |
Protein GI | 116750174 |
COG category | [G] Carbohydrate transport and metabolism [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0451] Nucleoside-diphosphate-sugar epimerases |
TIGRFAM ID | [TIGR02197] ADP-L-glycero-D-manno-heptose-6-epimerase |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.0314345 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAAGGG TAATCGTTAC CGGCGGGGCC GGCTTCATCG GCAGCGCCTT CATCTGGAAA CTCAACCGGG AAGGCGTTGA CGACATCCTT GTGGTGGACT CGCTGGGAAC CGGAGAGAAA TGGCGGAACC TTGCGGGGCT GCGCTTCTCG GATTATCTCC ACAAGAGCGA ATTCCTCCGG CGAATCGATG CCGGCACGCT TTCCTTCTCT CCCGAGGCCG TCGTCCACAT GGGAGCCTGT TCGTCCACCG CGGAACGGGA TGCCGATTAC CTCATGGAAA ACAACACCCG CTTCACCCGG ACGCTCGCGC AGTGGGCGGT CCAACGGAAG CGGCGATTCC TTTACGCAAG CAGTGCCGCG ACCTACGGAA ACGGAGAAGC GGGTTTCTCC GATCGAACCG ACCTCATCAG GCTGCGTCCC ATGAATATGT ACGGGTATTC GAAACATGCT TTCGACCTCC ACGCCGAGCG CACCGGCCTG CTCGGAAAGA TCGTCGGCCT GAAATTCTTC AATGTATTCG GTCCAAACGA ATACCATAAG GGGGACATGG CGAGCGTAGT GTTCAAGGCG TGTCGTCAGA TCGCGGAAAC CGGGCGGGTG CGGCTATTCC GGTCACACCG GGTTGAGTGC GCGCACGGCG AGCAGTCGCG GGATTTCATA TACGTGAAGG ACTGCATCGA TGTGATGTGG TGGCTGTTGA CCCACGGGGA CGTGAACGGT CTCTTCAACC TGGGAACGGG CCGGGCACGG ACCTGGAACG ACTTGGCCAA GGCGGTCTTC GCTGCCCTGC GGTGCCGGCC CGAAATCGAA TACATCCCCA TGCCGGAGCC CATCCGGGAA ACATACCAGT ATCACACCCG TGCAAGCATG GCTTCCCTGA GGGCAACCGG CTGTCCGTTG ACGTTCCGTT CGATGGAGGA GGCGGTGCAT GATTACGTGG CGAATCATCT GCAGGCACAG GATCGTTATC TGTGCTCCGC GAGCCGGAAT GTTCGTGCGG TGGAATCACG GGGCGCCGAT GCGGGAATCA ACGATCCAGG TGTGAAAGTG CCGCCATGA
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Protein sequence | MKRVIVTGGA GFIGSAFIWK LNREGVDDIL VVDSLGTGEK WRNLAGLRFS DYLHKSEFLR RIDAGTLSFS PEAVVHMGAC SSTAERDADY LMENNTRFTR TLAQWAVQRK RRFLYASSAA TYGNGEAGFS DRTDLIRLRP MNMYGYSKHA FDLHAERTGL LGKIVGLKFF NVFGPNEYHK GDMASVVFKA CRQIAETGRV RLFRSHRVEC AHGEQSRDFI YVKDCIDVMW WLLTHGDVNG LFNLGTGRAR TWNDLAKAVF AALRCRPEIE YIPMPEPIRE TYQYHTRASM ASLRATGCPL TFRSMEEAVH DYVANHLQAQ DRYLCSASRN VRAVESRGAD AGINDPGVKV PP
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